Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
AP1S1P61966 AL512652.2-201ENST00000625156 1716 ntBASIC16.84■□□□□ 0.29
AP1S1P61966 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
AP1S1P61966 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
AP1S1P61966 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
AP1S1P61966 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
AP1S1P61966 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
AP1S1P61966 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16.84■□□□□ 0.29
AP1S1P61966 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
AP1S1P61966 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
AP1S1P61966 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
AP1S1P61966 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.84■□□□□ 0.29
AP1S1P61966 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
AP1S1P61966 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.84■□□□□ 0.29
AP1S1P61966 PRORSD1P-202ENST00000563365 2154 ntBASIC16.84■□□□□ 0.29
AP1S1P61966 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
AP1S1P61966 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC16.84■□□□□ 0.29
AP1S1P61966 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC16.84■□□□□ 0.29
AP1S1P61966 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC16.84■□□□□ 0.29
AP1S1P61966 AC112482.1-201ENST00000492080 688 ntBASIC16.84■□□□□ 0.29
AP1S1P61966 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC16.84■□□□□ 0.29
AP1S1P61966 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC16.84■□□□□ 0.29
AP1S1P61966 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC16.84■□□□□ 0.29
AP1S1P61966 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
AP1S1P61966 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC16.84■□□□□ 0.29
AP1S1P61966 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.84■□□□□ 0.29
AP1S1P61966 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
AP1S1P61966 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
AP1S1P61966 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
AP1S1P61966 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
AP1S1P61966 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
AP1S1P61966 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
AP1S1P61966 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
AP1S1P61966 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
AP1S1P61966 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
AP1S1P61966 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
AP1S1P61966 ELL2P1-201ENST00000413990 1906 ntBASIC16.84■□□□□ 0.29
AP1S1P61966 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
AP1S1P61966 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
AP1S1P61966 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
AP1S1P61966 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
AP1S1P61966 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
AP1S1P61966 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
AP1S1P61966 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
AP1S1P61966 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
AP1S1P61966 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
AP1S1P61966 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
AP1S1P61966 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
AP1S1P61966 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
AP1S1P61966 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
AP1S1P61966 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
AP1S1P61966 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
AP1S1P61966 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
AP1S1P61966 HLA-A-202ENST00000376806 1854 ntBASIC16.83■□□□□ 0.28
AP1S1P61966 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
AP1S1P61966 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
AP1S1P61966 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
AP1S1P61966 AL355306.1-201ENST00000415580 579 ntBASIC16.83■□□□□ 0.28
AP1S1P61966 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
AP1S1P61966 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC16.83■□□□□ 0.28
AP1S1P61966 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC16.83■□□□□ 0.28
AP1S1P61966 FAM86C2P-203ENST00000528684 1004 ntBASIC16.83■□□□□ 0.28
AP1S1P61966 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
AP1S1P61966 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC16.83■□□□□ 0.28
AP1S1P61966 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC16.83■□□□□ 0.28
AP1S1P61966 RARRES2P8-201ENST00000566335 367 ntBASIC16.83■□□□□ 0.28
AP1S1P61966 IGHV3OR16-6-201ENST00000568775 360 ntBASIC16.83■□□□□ 0.28
AP1S1P61966 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
AP1S1P61966 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
AP1S1P61966 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC16.83■□□□□ 0.28
AP1S1P61966 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
AP1S1P61966 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
AP1S1P61966 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
AP1S1P61966 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
AP1S1P61966 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
AP1S1P61966 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
AP1S1P61966 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
AP1S1P61966 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
AP1S1P61966 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
AP1S1P61966 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
AP1S1P61966 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
AP1S1P61966 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
AP1S1P61966 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
AP1S1P61966 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
AP1S1P61966 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
AP1S1P61966 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
AP1S1P61966 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
AP1S1P61966 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.82■□□□□ 0.28
AP1S1P61966 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
AP1S1P61966 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
AP1S1P61966 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
AP1S1P61966 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.82■□□□□ 0.28
AP1S1P61966 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16.82■□□□□ 0.28
AP1S1P61966 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
AP1S1P61966 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC16.82■□□□□ 0.28
AP1S1P61966 WASH6P-202ENST00000359512 1437 ntBASIC16.82■□□□□ 0.28
AP1S1P61966 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
AP1S1P61966 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
AP1S1P61966 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.82■□□□□ 0.28
AP1S1P61966 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms