Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDC42P60953 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
CDC42P60953 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDC42P60953 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDC42P60953 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC15.39■□□□□ 0.05
CDC42P60953 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDC42P60953 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDC42P60953 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDC42P60953 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CDC42P60953 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
CDC42P60953 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC15.39■□□□□ 0.05
CDC42P60953 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDC42P60953 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDC42P60953 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CDC42P60953 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
CDC42P60953 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDC42P60953 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDC42P60953 AL596275.1-201ENST00000423464 877 ntBASIC15.39■□□□□ 0.05
CDC42P60953 NKTR-203ENST00000442970 646 ntTSL 2 BASIC15.39■□□□□ 0.05
CDC42P60953 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC15.39■□□□□ 0.05
CDC42P60953 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC15.39■□□□□ 0.05
CDC42P60953 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC15.39■□□□□ 0.05
CDC42P60953 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC15.39■□□□□ 0.05
CDC42P60953 RNF126P1-202ENST00000569893 925 ntBASIC15.39■□□□□ 0.05
CDC42P60953 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC15.39■□□□□ 0.05
CDC42P60953 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC15.39■□□□□ 0.05
CDC42P60953 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDC42P60953 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC15.39■□□□□ 0.05
CDC42P60953 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDC42P60953 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
CDC42P60953 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDC42P60953 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CDC42P60953 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CDC42P60953 AC068418.2-201ENST00000577309 3703 ntBASIC15.39■□□□□ 0.05
CDC42P60953 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDC42P60953 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDC42P60953 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC15.39■□□□□ 0.05
CDC42P60953 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDC42P60953 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CDC42P60953 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
CDC42P60953 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC15.39■□□□□ 0.05
CDC42P60953 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CDC42P60953 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC15.39■□□□□ 0.05
CDC42P60953 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CDC42P60953 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC15.39■□□□□ 0.05
CDC42P60953 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.39■□□□□ 0.05
CDC42P60953 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
CDC42P60953 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.38■□□□□ 0.05
CDC42P60953 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CDC42P60953 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CDC42P60953 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC15.38■□□□□ 0.05
CDC42P60953 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
CDC42P60953 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CDC42P60953 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC15.38■□□□□ 0.05
CDC42P60953 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
CDC42P60953 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDC42P60953 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDC42P60953 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC15.38■□□□□ 0.05
CDC42P60953 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC15.38■□□□□ 0.05
CDC42P60953 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CDC42P60953 PC-204ENST00000524491 1714 ntTSL 2 BASIC15.38■□□□□ 0.05
CDC42P60953 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC15.38■□□□□ 0.05
CDC42P60953 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
CDC42P60953 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC15.38■□□□□ 0.05
CDC42P60953 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC15.38■□□□□ 0.05
CDC42P60953 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CDC42P60953 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDC42P60953 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDC42P60953 CD9-202ENST00000382515 1229 ntTSL 5 BASIC15.38■□□□□ 0.05
CDC42P60953 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC15.38■□□□□ 0.05
CDC42P60953 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDC42P60953 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC15.38■□□□□ 0.05
CDC42P60953 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC15.38■□□□□ 0.05
CDC42P60953 AC145285.6-201ENST00000604632 637 ntBASIC15.38■□□□□ 0.05
CDC42P60953 AL139011.1-202ENST00000642063 584 ntBASIC15.38■□□□□ 0.05
CDC42P60953 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDC42P60953 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CDC42P60953 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC15.38■□□□□ 0.05
CDC42P60953 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDC42P60953 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CDC42P60953 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CDC42P60953 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC15.38■□□□□ 0.05
CDC42P60953 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDC42P60953 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC15.38■□□□□ 0.05
CDC42P60953 AC132938.5-201ENST00000624980 1813 ntBASIC15.38■□□□□ 0.05
CDC42P60953 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDC42P60953 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDC42P60953 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC15.38■□□□□ 0.05
CDC42P60953 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC15.38■□□□□ 0.05
CDC42P60953 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDC42P60953 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CDC42P60953 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CDC42P60953 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CDC42P60953 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CDC42P60953 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
CDC42P60953 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CDC42P60953 AC092384.3-202ENST00000564646 2873 ntBASIC15.37■□□□□ 0.05
CDC42P60953 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CDC42P60953 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CDC42P60953 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC15.37■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms