Protein–RNA interactions for Protein: P60510

PPP4C, Serine/threonine-protein phosphatase 4 catalytic subunit, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4CP60510 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PPP4CP60510 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PPP4CP60510 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PPP4CP60510 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC19.67■□□□□ 0.74
PPP4CP60510 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PPP4CP60510 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
PPP4CP60510 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC19.67■□□□□ 0.74
PPP4CP60510 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PPP4CP60510 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
PPP4CP60510 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
PPP4CP60510 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
PPP4CP60510 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC19.67■□□□□ 0.74
PPP4CP60510 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC19.67■□□□□ 0.74
PPP4CP60510 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC19.67■□□□□ 0.74
PPP4CP60510 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC19.67■□□□□ 0.74
PPP4CP60510 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC19.67■□□□□ 0.74
PPP4CP60510 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC19.67■□□□□ 0.74
PPP4CP60510 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.67■□□□□ 0.74
PPP4CP60510 AC005915.1-201ENST00000624912 2018 ntBASIC19.67■□□□□ 0.74
PPP4CP60510 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PPP4CP60510 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC19.67■□□□□ 0.74
PPP4CP60510 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC19.67■□□□□ 0.74
PPP4CP60510 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC19.67■□□□□ 0.74
PPP4CP60510 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC19.67■□□□□ 0.74
PPP4CP60510 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
PPP4CP60510 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
PPP4CP60510 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PPP4CP60510 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
PPP4CP60510 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PPP4CP60510 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PPP4CP60510 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PPP4CP60510 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
PPP4CP60510 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
PPP4CP60510 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PPP4CP60510 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC19.66■□□□□ 0.74
PPP4CP60510 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PPP4CP60510 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PPP4CP60510 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PPP4CP60510 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
PPP4CP60510 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PPP4CP60510 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC19.66■□□□□ 0.74
PPP4CP60510 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PPP4CP60510 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC19.66■□□□□ 0.74
PPP4CP60510 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC19.66■□□□□ 0.74
PPP4CP60510 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC19.66■□□□□ 0.74
PPP4CP60510 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC19.66■□□□□ 0.74
PPP4CP60510 BANF1P1-201ENST00000553684 263 ntBASIC19.66■□□□□ 0.74
PPP4CP60510 NAA60-208ENST00000570819 833 ntTSL 2 BASIC19.66■□□□□ 0.74
PPP4CP60510 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC19.66■□□□□ 0.74
PPP4CP60510 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC19.66■□□□□ 0.74
PPP4CP60510 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC19.66■□□□□ 0.74
PPP4CP60510 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PPP4CP60510 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PPP4CP60510 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PPP4CP60510 AL035456.1-201ENST00000456064 1369 ntBASIC19.66■□□□□ 0.74
PPP4CP60510 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PPP4CP60510 AC005332.8-201ENST00000622750 2735 ntBASIC19.66■□□□□ 0.74
PPP4CP60510 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PPP4CP60510 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC19.66■□□□□ 0.74
PPP4CP60510 LETM1P2-201ENST00000597330 2178 ntBASIC19.66■□□□□ 0.74
PPP4CP60510 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
PPP4CP60510 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PPP4CP60510 GRAMD4P3-201ENST00000621665 1669 ntBASIC19.65■□□□□ 0.74
PPP4CP60510 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
PPP4CP60510 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.65■□□□□ 0.74
PPP4CP60510 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
PPP4CP60510 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PPP4CP60510 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PPP4CP60510 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PPP4CP60510 EML3-212ENST00000494176 2901 ntTSL 2 BASIC19.65■□□□□ 0.74
PPP4CP60510 EML3-216ENST00000529309 2909 ntTSL 2 BASIC19.65■□□□□ 0.74
PPP4CP60510 TSSK5P-201ENST00000423978 907 ntBASIC19.65■□□□□ 0.74
PPP4CP60510 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC19.65■□□□□ 0.74
PPP4CP60510 SATB1-217ENST00000493952 626 ntTSL 3 BASIC19.65■□□□□ 0.74
PPP4CP60510 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC19.65■□□□□ 0.74
PPP4CP60510 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC19.65■□□□□ 0.74
PPP4CP60510 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
PPP4CP60510 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC19.65■□□□□ 0.74
PPP4CP60510 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC19.65■□□□□ 0.74
PPP4CP60510 MIR4745-201ENST00000577608 62 ntBASIC19.65■□□□□ 0.74
PPP4CP60510 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC19.65■□□□□ 0.74
PPP4CP60510 AL390754.1-201ENST00000619088 582 ntBASIC19.65■□□□□ 0.74
PPP4CP60510 AC073592.8-201ENST00000624126 511 ntBASIC19.65■□□□□ 0.74
PPP4CP60510 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PPP4CP60510 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PPP4CP60510 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PPP4CP60510 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
PPP4CP60510 AL589702.1-201ENST00000641229 1509 ntBASIC19.65■□□□□ 0.74
PPP4CP60510 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
PPP4CP60510 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC19.65■□□□□ 0.74
PPP4CP60510 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PPP4CP60510 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
PPP4CP60510 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
PPP4CP60510 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
PPP4CP60510 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC19.65■□□□□ 0.74
PPP4CP60510 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
PPP4CP60510 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC19.64■□□□□ 0.74
PPP4CP60510 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PPP4CP60510 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
PPP4CP60510 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms