Protein–RNA interactions for Protein: P56748

CLDN8, Claudin-8, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN8P56748 AC131009.4-201ENST00000624048 1740 ntBASIC15.96■□□□□ 0.15
CLDN8P56748 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CLDN8P56748 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC15.96■□□□□ 0.15
CLDN8P56748 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CLDN8P56748 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CLDN8P56748 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.14
CLDN8P56748 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CLDN8P56748 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC15.96■□□□□ 0.14
CLDN8P56748 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC15.95■□□□□ 0.14
CLDN8P56748 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC15.95■□□□□ 0.14
CLDN8P56748 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLDN8P56748 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
CLDN8P56748 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CLDN8P56748 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLDN8P56748 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC15.95■□□□□ 0.14
CLDN8P56748 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLDN8P56748 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC15.95■□□□□ 0.14
CLDN8P56748 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC15.95■□□□□ 0.14
CLDN8P56748 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CLDN8P56748 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC15.95■□□□□ 0.14
CLDN8P56748 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CLDN8P56748 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
CLDN8P56748 AL365203.3-201ENST00000609742 2057 ntBASIC15.95■□□□□ 0.14
CLDN8P56748 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC15.95■□□□□ 0.14
CLDN8P56748 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC15.95■□□□□ 0.14
CLDN8P56748 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CLDN8P56748 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC15.95■□□□□ 0.14
CLDN8P56748 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC15.95■□□□□ 0.14
CLDN8P56748 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLDN8P56748 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CLDN8P56748 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLDN8P56748 TSPY19P-201ENST00000418461 509 ntBASIC15.95■□□□□ 0.14
CLDN8P56748 TSPY18P-201ENST00000441642 509 ntBASIC15.95■□□□□ 0.14
CLDN8P56748 SCARNA2-201ENST00000458748 420 ntBASIC15.95■□□□□ 0.14
CLDN8P56748 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC15.95■□□□□ 0.14
CLDN8P56748 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CLDN8P56748 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC15.95■□□□□ 0.14
CLDN8P56748 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CLDN8P56748 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CLDN8P56748 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC15.95■□□□□ 0.14
CLDN8P56748 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC15.95■□□□□ 0.14
CLDN8P56748 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC15.95■□□□□ 0.14
CLDN8P56748 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC15.95■□□□□ 0.14
CLDN8P56748 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CLDN8P56748 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC15.95■□□□□ 0.14
CLDN8P56748 SDCCAG3P1-201ENST00000589292 1150 ntBASIC15.95■□□□□ 0.14
CLDN8P56748 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC15.95■□□□□ 0.14
CLDN8P56748 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CLDN8P56748 AL805961.1-202ENST00000641562 540 ntBASIC15.95■□□□□ 0.14
CLDN8P56748 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLDN8P56748 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CLDN8P56748 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLDN8P56748 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLDN8P56748 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC15.95■□□□□ 0.14
CLDN8P56748 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
CLDN8P56748 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC15.95■□□□□ 0.14
CLDN8P56748 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CLDN8P56748 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC15.95■□□□□ 0.14
CLDN8P56748 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CLDN8P56748 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CLDN8P56748 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CLDN8P56748 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLDN8P56748 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLDN8P56748 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLDN8P56748 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLDN8P56748 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLDN8P56748 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLDN8P56748 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CLDN8P56748 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.94■□□□□ 0.14
CLDN8P56748 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC15.94■□□□□ 0.14
CLDN8P56748 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CLDN8P56748 LTF-203ENST00000426532 2494 ntTSL 2 BASIC15.94■□□□□ 0.14
CLDN8P56748 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CLDN8P56748 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CLDN8P56748 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CLDN8P56748 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CLDN8P56748 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
CLDN8P56748 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CLDN8P56748 AL162727.3-201ENST00000635661 2787 ntBASIC15.94■□□□□ 0.14
CLDN8P56748 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CLDN8P56748 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC15.94■□□□□ 0.14
CLDN8P56748 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
CLDN8P56748 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CLDN8P56748 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
CLDN8P56748 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CLDN8P56748 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CLDN8P56748 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CLDN8P56748 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC15.94■□□□□ 0.14
CLDN8P56748 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC15.94■□□□□ 0.14
CLDN8P56748 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CLDN8P56748 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC15.94■□□□□ 0.14
CLDN8P56748 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CLDN8P56748 SLC25A6P2-201ENST00000497974 877 ntBASIC15.94■□□□□ 0.14
CLDN8P56748 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC15.94■□□□□ 0.14
CLDN8P56748 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC15.94■□□□□ 0.14
CLDN8P56748 NT5C-211ENST00000582170 653 ntTSL 3 BASIC15.94■□□□□ 0.14
CLDN8P56748 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC15.94■□□□□ 0.14
CLDN8P56748 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC15.94■□□□□ 0.14
CLDN8P56748 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CLDN8P56748 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms