Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLDN6P56747 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC16.05■□□□□ 0.16
CLDN6P56747 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC16.05■□□□□ 0.16
CLDN6P56747 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC16.05■□□□□ 0.16
CLDN6P56747 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC16.05■□□□□ 0.16
CLDN6P56747 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC16.05■□□□□ 0.16
CLDN6P56747 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
CLDN6P56747 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CLDN6P56747 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLDN6P56747 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.05■□□□□ 0.16
CLDN6P56747 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC16.05■□□□□ 0.16
CLDN6P56747 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLDN6P56747 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CLDN6P56747 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLDN6P56747 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLDN6P56747 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
CLDN6P56747 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.04■□□□□ 0.16
CLDN6P56747 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CLDN6P56747 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
CLDN6P56747 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLDN6P56747 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CLDN6P56747 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLDN6P56747 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.04■□□□□ 0.16
CLDN6P56747 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CLDN6P56747 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLDN6P56747 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CLDN6P56747 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC16.04■□□□□ 0.16
CLDN6P56747 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLDN6P56747 AC010336.2-201ENST00000564226 506 ntBASIC16.04■□□□□ 0.16
CLDN6P56747 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CLDN6P56747 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC16.04■□□□□ 0.16
CLDN6P56747 SERF2-217ENST00000630046 862 ntTSL 5 BASIC16.04■□□□□ 0.16
CLDN6P56747 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLDN6P56747 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CLDN6P56747 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.04■□□□□ 0.16
CLDN6P56747 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CLDN6P56747 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLDN6P56747 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLDN6P56747 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.04■□□□□ 0.16
CLDN6P56747 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLDN6P56747 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLDN6P56747 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLDN6P56747 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLDN6P56747 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLDN6P56747 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN6P56747 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN6P56747 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN6P56747 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
CLDN6P56747 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN6P56747 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN6P56747 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN6P56747 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC16.03■□□□□ 0.16
CLDN6P56747 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN6P56747 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.03■□□□□ 0.16
CLDN6P56747 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN6P56747 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN6P56747 CALY-202ENST00000368555 783 ntTSL 2 BASIC16.03■□□□□ 0.16
CLDN6P56747 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN6P56747 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.03■□□□□ 0.16
CLDN6P56747 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC16.03■□□□□ 0.16
CLDN6P56747 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC16.03■□□□□ 0.16
CLDN6P56747 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC16.03■□□□□ 0.16
CLDN6P56747 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC16.03■□□□□ 0.16
CLDN6P56747 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC16.03■□□□□ 0.16
CLDN6P56747 IGHV3-71-201ENST00000523324 359 ntBASIC16.03■□□□□ 0.16
CLDN6P56747 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN6P56747 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
CLDN6P56747 AC009407.1-201ENST00000568958 598 ntBASIC16.03■□□□□ 0.16
CLDN6P56747 AL132655.2-201ENST00000596276 594 ntBASIC16.03■□□□□ 0.16
CLDN6P56747 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC16.03■□□□□ 0.16
CLDN6P56747 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN6P56747 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
CLDN6P56747 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN6P56747 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.03■□□□□ 0.16
CLDN6P56747 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.03■□□□□ 0.16
CLDN6P56747 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
CLDN6P56747 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN6P56747 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.03■□□□□ 0.16
CLDN6P56747 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN6P56747 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
CLDN6P56747 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC16.03■□□□□ 0.16
CLDN6P56747 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN6P56747 AC007541.1-201ENST00000570282 1469 ntBASIC16.03■□□□□ 0.16
CLDN6P56747 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.03■□□□□ 0.16
CLDN6P56747 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN6P56747 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.03■□□□□ 0.16
CLDN6P56747 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLDN6P56747 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
CLDN6P56747 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLDN6P56747 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLDN6P56747 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CLDN6P56747 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
CLDN6P56747 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLDN6P56747 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.02■□□□□ 0.16
CLDN6P56747 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLDN6P56747 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC16.02■□□□□ 0.16
CLDN6P56747 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLDN6P56747 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLDN6P56747 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CLDN6P56747 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms