Protein–RNA interactions for Protein: P55210

CASP7, Caspase-7, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP7P55210 TSSK5P-201ENST00000423978 907 ntBASIC20.55■□□□□ 0.88
CASP7P55210 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC20.55■□□□□ 0.88
CASP7P55210 WDR53-203ENST00000429115 683 ntTSL 2 BASIC20.55■□□□□ 0.88
CASP7P55210 AC093214.1-201ENST00000511688 1107 ntBASIC20.55■□□□□ 0.88
CASP7P55210 AC069120.2-201ENST00000524091 540 ntBASIC20.55■□□□□ 0.88
CASP7P55210 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC20.55■□□□□ 0.88
CASP7P55210 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CASP7P55210 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC20.55■□□□□ 0.88
CASP7P55210 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CASP7P55210 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CASP7P55210 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CASP7P55210 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CASP7P55210 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC20.54■□□□□ 0.88
CASP7P55210 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CASP7P55210 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC20.54■□□□□ 0.88
CASP7P55210 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
CASP7P55210 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CASP7P55210 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CASP7P55210 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CASP7P55210 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CASP7P55210 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CASP7P55210 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CASP7P55210 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CASP7P55210 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC20.54■□□□□ 0.88
CASP7P55210 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC20.54■□□□□ 0.88
CASP7P55210 SATB1-217ENST00000493952 626 ntTSL 3 BASIC20.54■□□□□ 0.88
CASP7P55210 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CASP7P55210 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC20.54■□□□□ 0.88
CASP7P55210 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CASP7P55210 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC20.54■□□□□ 0.88
CASP7P55210 AL133215.2-201ENST00000609242 977 ntBASIC20.54■□□□□ 0.88
CASP7P55210 SPDYE12P-201ENST00000618416 771 ntBASIC20.54■□□□□ 0.88
CASP7P55210 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CASP7P55210 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CASP7P55210 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CASP7P55210 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC20.54■□□□□ 0.88
CASP7P55210 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CASP7P55210 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC20.54■□□□□ 0.88
CASP7P55210 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CASP7P55210 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
CASP7P55210 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
CASP7P55210 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CASP7P55210 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC20.54■□□□□ 0.88
CASP7P55210 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CASP7P55210 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC20.53■□□□□ 0.88
CASP7P55210 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CASP7P55210 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CASP7P55210 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CASP7P55210 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CASP7P55210 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC20.53■□□□□ 0.88
CASP7P55210 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CASP7P55210 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CASP7P55210 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CASP7P55210 VMA21-202ENST00000370361 693 ntTSL 5 BASIC20.53■□□□□ 0.88
CASP7P55210 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC20.53■□□□□ 0.88
CASP7P55210 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
CASP7P55210 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC20.53■□□□□ 0.88
CASP7P55210 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
CASP7P55210 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC20.53■□□□□ 0.88
CASP7P55210 AC061975.2-201ENST00000581722 295 ntBASIC20.53■□□□□ 0.88
CASP7P55210 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC20.53■□□□□ 0.88
CASP7P55210 AJ011932.1-201ENST00000621707 465 ntBASIC20.53■□□□□ 0.88
CASP7P55210 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CASP7P55210 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC20.53■□□□□ 0.88
CASP7P55210 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
CASP7P55210 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC20.53■□□□□ 0.88
CASP7P55210 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CASP7P55210 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
CASP7P55210 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC20.53■□□□□ 0.88
CASP7P55210 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CASP7P55210 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CASP7P55210 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CASP7P55210 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
CASP7P55210 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC20.52■□□□□ 0.88
CASP7P55210 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
CASP7P55210 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CASP7P55210 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
CASP7P55210 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CASP7P55210 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC20.52■□□□□ 0.88
CASP7P55210 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC20.52■□□□□ 0.88
CASP7P55210 KLK8-202ENST00000320838 456 ntTSL 5 BASIC20.52■□□□□ 0.88
CASP7P55210 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
CASP7P55210 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
CASP7P55210 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
CASP7P55210 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC20.52■□□□□ 0.88
CASP7P55210 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CASP7P55210 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CASP7P55210 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC20.52■□□□□ 0.88
CASP7P55210 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC20.52■□□□□ 0.88
CASP7P55210 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CASP7P55210 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC20.52■□□□□ 0.88
CASP7P55210 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC20.52■□□□□ 0.88
CASP7P55210 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC20.52■□□□□ 0.88
CASP7P55210 AC092364.2-202ENST00000597012 1073 ntBASIC20.52■□□□□ 0.88
CASP7P55210 AC003101.2-201ENST00000612557 442 ntBASIC20.52■□□□□ 0.88
CASP7P55210 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CASP7P55210 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC20.52■□□□□ 0.88
CASP7P55210 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
CASP7P55210 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CASP7P55210 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms