Protein–RNA interactions for Protein: P55036

PSMD4, 26S proteasome non-ATPase regulatory subunit 4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4P55036 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PSMD4P55036 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
PSMD4P55036 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PSMD4P55036 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
PSMD4P55036 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PSMD4P55036 LINC00895-201ENST00000629028 1637 ntBASIC15.65■□□□□ 0.1
PSMD4P55036 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.1
PSMD4P55036 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PSMD4P55036 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC15.64■□□□□ 0.09
PSMD4P55036 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PSMD4P55036 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PSMD4P55036 AC002310.6-201ENST00000624451 1377 ntBASIC15.64■□□□□ 0.09
PSMD4P55036 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC15.64■□□□□ 0.09
PSMD4P55036 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
PSMD4P55036 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC15.64■□□□□ 0.09
PSMD4P55036 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
PSMD4P55036 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC15.64■□□□□ 0.09
PSMD4P55036 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC15.64■□□□□ 0.09
PSMD4P55036 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC15.64■□□□□ 0.09
PSMD4P55036 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PSMD4P55036 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PSMD4P55036 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PSMD4P55036 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PSMD4P55036 CENPM-204ENST00000402420 688 ntTSL 5 BASIC15.64■□□□□ 0.09
PSMD4P55036 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC15.64■□□□□ 0.09
PSMD4P55036 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
PSMD4P55036 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PSMD4P55036 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC15.64■□□□□ 0.09
PSMD4P55036 PRSS29P-201ENST00000440800 595 ntBASIC15.64■□□□□ 0.09
PSMD4P55036 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PSMD4P55036 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
PSMD4P55036 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC15.64■□□□□ 0.09
PSMD4P55036 AC010654.1-201ENST00000615722 808 ntBASIC15.64■□□□□ 0.09
PSMD4P55036 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PSMD4P55036 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
PSMD4P55036 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PSMD4P55036 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
PSMD4P55036 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PSMD4P55036 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.64■□□□□ 0.09
PSMD4P55036 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PSMD4P55036 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
PSMD4P55036 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
PSMD4P55036 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PSMD4P55036 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
PSMD4P55036 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC15.64■□□□□ 0.09
PSMD4P55036 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC15.64■□□□□ 0.09
PSMD4P55036 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC15.63■□□□□ 0.09
PSMD4P55036 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
PSMD4P55036 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PSMD4P55036 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
PSMD4P55036 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC15.63■□□□□ 0.09
PSMD4P55036 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PSMD4P55036 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC15.63■□□□□ 0.09
PSMD4P55036 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC15.63■□□□□ 0.09
PSMD4P55036 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PSMD4P55036 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PSMD4P55036 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PSMD4P55036 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PSMD4P55036 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PSMD4P55036 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC15.63■□□□□ 0.09
PSMD4P55036 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PSMD4P55036 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC15.63■□□□□ 0.09
PSMD4P55036 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
PSMD4P55036 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC15.63■□□□□ 0.09
PSMD4P55036 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PSMD4P55036 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC15.63■□□□□ 0.09
PSMD4P55036 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC15.63■□□□□ 0.09
PSMD4P55036 AC108073.2-201ENST00000464002 357 ntBASIC15.63■□□□□ 0.09
PSMD4P55036 AC108751.1-201ENST00000490852 363 ntBASIC15.63■□□□□ 0.09
PSMD4P55036 RNA5SP419-201ENST00000515908 135 ntBASIC15.63■□□□□ 0.09
PSMD4P55036 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
PSMD4P55036 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
PSMD4P55036 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC15.63■□□□□ 0.09
PSMD4P55036 RIN3-211ENST00000557762 517 ntTSL 3 BASIC15.63■□□□□ 0.09
PSMD4P55036 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC15.63■□□□□ 0.09
PSMD4P55036 TCAP-202ENST00000578283 583 ntTSL 5 BASIC15.63■□□□□ 0.09
PSMD4P55036 AC091167.2-201ENST00000579581 588 ntBASIC15.63■□□□□ 0.09
PSMD4P55036 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PSMD4P55036 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PSMD4P55036 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PSMD4P55036 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC15.63■□□□□ 0.09
PSMD4P55036 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.63■□□□□ 0.09
PSMD4P55036 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PSMD4P55036 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PSMD4P55036 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PSMD4P55036 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PSMD4P55036 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC15.63■□□□□ 0.09
PSMD4P55036 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PSMD4P55036 PCDHB17P-201ENST00000539533 2393 ntBASIC15.63■□□□□ 0.09
PSMD4P55036 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC15.63■□□□□ 0.09
PSMD4P55036 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC15.63■□□□□ 0.09
PSMD4P55036 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC15.63■□□□□ 0.09
PSMD4P55036 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC15.63■□□□□ 0.09
PSMD4P55036 NF2-208ENST00000403435 2568 ntTSL 5 BASIC15.63■□□□□ 0.09
PSMD4P55036 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PSMD4P55036 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
PSMD4P55036 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PSMD4P55036 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC15.63■□□□□ 0.09
PSMD4P55036 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.63■□□□□ 0.09
PSMD4P55036 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms