Protein–RNA interactions for Protein: P54829

PTPN5, Tyrosine-protein phosphatase non-receptor type 5, humanhuman

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN5P54829 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTPN5P54829 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTPN5P54829 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTPN5P54829 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTPN5P54829 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PTPN5P54829 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PTPN5P54829 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
PTPN5P54829 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC17.29■□□□□ 0.36
PTPN5P54829 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
PTPN5P54829 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTPN5P54829 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
PTPN5P54829 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
PTPN5P54829 AC079776.1-201ENST00000401540 1152 ntBASIC17.29■□□□□ 0.36
PTPN5P54829 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTPN5P54829 PACS1-203ENST00000524815 628 ntTSL 4 BASIC17.29■□□□□ 0.36
PTPN5P54829 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC17.29■□□□□ 0.36
PTPN5P54829 RAB43P1-201ENST00000561790 589 ntBASIC17.29■□□□□ 0.36
PTPN5P54829 AC140912.1-201ENST00000577171 1054 ntBASIC17.29■□□□□ 0.36
PTPN5P54829 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTPN5P54829 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PTPN5P54829 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PTPN5P54829 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTPN5P54829 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.29■□□□□ 0.36
PTPN5P54829 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTPN5P54829 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
PTPN5P54829 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTPN5P54829 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTPN5P54829 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTPN5P54829 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.28■□□□□ 0.36
PTPN5P54829 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC17.28■□□□□ 0.36
PTPN5P54829 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PTPN5P54829 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PTPN5P54829 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.28■□□□□ 0.36
PTPN5P54829 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.28■□□□□ 0.36
PTPN5P54829 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PTPN5P54829 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PTPN5P54829 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PTPN5P54829 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PTPN5P54829 CROCCP2-202ENST00000412962 2773 ntBASIC17.28■□□□□ 0.36
PTPN5P54829 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PTPN5P54829 PGF-202ENST00000405431 666 ntTSL 5 BASIC17.28■□□□□ 0.36
PTPN5P54829 HAUS4P1-201ENST00000406739 1145 ntBASIC17.28■□□□□ 0.36
PTPN5P54829 LINC00982-205ENST00000420957 435 ntBASIC17.28■□□□□ 0.36
PTPN5P54829 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PTPN5P54829 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC17.28■□□□□ 0.36
PTPN5P54829 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PTPN5P54829 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC17.28■□□□□ 0.36
PTPN5P54829 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC17.28■□□□□ 0.36
PTPN5P54829 IGHV3-72-202ENST00000621503 303 ntBASIC17.28■□□□□ 0.36
PTPN5P54829 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PTPN5P54829 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PTPN5P54829 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PTPN5P54829 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PTPN5P54829 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PTPN5P54829 AC100757.3-201ENST00000622361 1406 ntBASIC17.28■□□□□ 0.36
PTPN5P54829 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PTPN5P54829 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PTPN5P54829 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.28■□□□□ 0.36
PTPN5P54829 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
PTPN5P54829 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.27■□□□□ 0.36
PTPN5P54829 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PTPN5P54829 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.27■□□□□ 0.36
PTPN5P54829 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.27■□□□□ 0.36
PTPN5P54829 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PTPN5P54829 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
PTPN5P54829 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PTPN5P54829 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
PTPN5P54829 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PTPN5P54829 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PTPN5P54829 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.27■□□□□ 0.36
PTPN5P54829 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
PTPN5P54829 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
PTPN5P54829 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
PTPN5P54829 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
PTPN5P54829 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC17.27■□□□□ 0.36
PTPN5P54829 HCG4-201ENST00000418983 998 ntBASIC17.27■□□□□ 0.36
PTPN5P54829 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC17.27■□□□□ 0.36
PTPN5P54829 INE1-201ENST00000456273 945 ntBASIC17.27■□□□□ 0.36
PTPN5P54829 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC17.27■□□□□ 0.36
PTPN5P54829 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC17.27■□□□□ 0.36
PTPN5P54829 AC027369.6-201ENST00000525520 931 ntBASIC17.27■□□□□ 0.36
PTPN5P54829 GATD1-206ENST00000526325 756 ntTSL 5 BASIC17.27■□□□□ 0.36
PTPN5P54829 KRT17P8-201ENST00000540749 863 ntBASIC17.27■□□□□ 0.36
PTPN5P54829 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
PTPN5P54829 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC17.27■□□□□ 0.36
PTPN5P54829 AL161645.1-201ENST00000622716 1255 ntBASIC17.27■□□□□ 0.36
PTPN5P54829 AC073592.8-201ENST00000624126 511 ntBASIC17.27■□□□□ 0.36
PTPN5P54829 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.27■□□□□ 0.36
PTPN5P54829 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
PTPN5P54829 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PTPN5P54829 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PTPN5P54829 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
PTPN5P54829 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.27■□□□□ 0.35
PTPN5P54829 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PTPN5P54829 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
PTPN5P54829 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
PTPN5P54829 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
PTPN5P54829 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PTPN5P54829 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.26■□□□□ 0.35
PTPN5P54829 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms