Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LIMK2P53671 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
LIMK2P53671 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC16.92■□□□□ 0.3
LIMK2P53671 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
LIMK2P53671 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC16.92■□□□□ 0.3
LIMK2P53671 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LIMK2P53671 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC16.92■□□□□ 0.3
LIMK2P53671 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC16.92■□□□□ 0.3
LIMK2P53671 NMU-202ENST00000505262 693 ntTSL 3 BASIC16.92■□□□□ 0.3
LIMK2P53671 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC16.92■□□□□ 0.3
LIMK2P53671 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC16.92■□□□□ 0.3
LIMK2P53671 ETFA-208ENST00000559602 792 ntTSL 3 BASIC16.92■□□□□ 0.3
LIMK2P53671 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC16.92■□□□□ 0.3
LIMK2P53671 AL353135.1-201ENST00000606729 504 ntBASIC16.92■□□□□ 0.3
LIMK2P53671 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.92■□□□□ 0.3
LIMK2P53671 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
LIMK2P53671 AC006538.1-201ENST00000567905 1585 ntBASIC16.92■□□□□ 0.3
LIMK2P53671 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LIMK2P53671 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LIMK2P53671 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LIMK2P53671 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LIMK2P53671 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
LIMK2P53671 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.92■□□□□ 0.3
LIMK2P53671 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
LIMK2P53671 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LIMK2P53671 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
LIMK2P53671 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LIMK2P53671 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.92■□□□□ 0.3
LIMK2P53671 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
LIMK2P53671 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
LIMK2P53671 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.91■□□□□ 0.3
LIMK2P53671 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.91■□□□□ 0.3
LIMK2P53671 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.91■□□□□ 0.3
LIMK2P53671 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
LIMK2P53671 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LIMK2P53671 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
LIMK2P53671 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
LIMK2P53671 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LIMK2P53671 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LIMK2P53671 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
LIMK2P53671 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LIMK2P53671 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LIMK2P53671 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
LIMK2P53671 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
LIMK2P53671 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.91■□□□□ 0.3
LIMK2P53671 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
LIMK2P53671 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.91■□□□□ 0.3
LIMK2P53671 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LIMK2P53671 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LIMK2P53671 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LIMK2P53671 NABP1-203ENST00000409510 843 ntTSL 5 BASIC16.91■□□□□ 0.3
LIMK2P53671 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LIMK2P53671 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC16.91■□□□□ 0.3
LIMK2P53671 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.91■□□□□ 0.3
LIMK2P53671 AL589182.2-201ENST00000619332 1049 ntBASIC16.91■□□□□ 0.3
LIMK2P53671 ALOX12P2-203ENST00000570921 1945 ntBASIC16.91■□□□□ 0.3
LIMK2P53671 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
LIMK2P53671 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LIMK2P53671 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
LIMK2P53671 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC16.91■□□□□ 0.3
LIMK2P53671 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.91■□□□□ 0.3
LIMK2P53671 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.91■□□□□ 0.3
LIMK2P53671 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LIMK2P53671 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LIMK2P53671 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
LIMK2P53671 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LIMK2P53671 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.91■□□□□ 0.3
LIMK2P53671 AL590787.1-201ENST00000568856 1315 ntBASIC16.91■□□□□ 0.3
LIMK2P53671 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LIMK2P53671 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LIMK2P53671 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
LIMK2P53671 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
LIMK2P53671 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LIMK2P53671 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LIMK2P53671 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
LIMK2P53671 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LIMK2P53671 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LIMK2P53671 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.91■□□□□ 0.3
LIMK2P53671 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LIMK2P53671 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC16.9■□□□□ 0.3
LIMK2P53671 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LIMK2P53671 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.9■□□□□ 0.3
LIMK2P53671 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC16.9■□□□□ 0.3
LIMK2P53671 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LIMK2P53671 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
LIMK2P53671 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LIMK2P53671 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
LIMK2P53671 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
LIMK2P53671 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC16.9■□□□□ 0.3
LIMK2P53671 AC092364.2-201ENST00000596710 2692 ntBASIC16.9■□□□□ 0.3
LIMK2P53671 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LIMK2P53671 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LIMK2P53671 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.9■□□□□ 0.3
LIMK2P53671 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.9■□□□□ 0.3
LIMK2P53671 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
LIMK2P53671 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LIMK2P53671 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC16.9■□□□□ 0.3
LIMK2P53671 AC073621.1-201ENST00000392730 636 ntBASIC16.9■□□□□ 0.3
LIMK2P53671 IMP4-203ENST00000409935 958 ntTSL 5 BASIC16.9■□□□□ 0.3
LIMK2P53671 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms