Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PDX1P52945 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
PDX1P52945 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PDX1P52945 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PDX1P52945 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
PDX1P52945 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.27■□□□□ 0.2
PDX1P52945 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PDX1P52945 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PDX1P52945 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PDX1P52945 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PDX1P52945 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PDX1P52945 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PDX1P52945 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.27■□□□□ 0.2
PDX1P52945 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PDX1P52945 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
PDX1P52945 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.27■□□□□ 0.2
PDX1P52945 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
PDX1P52945 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
PDX1P52945 BSG-215ENST00000618006 1329 ntTSL 2 BASIC16.27■□□□□ 0.2
PDX1P52945 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.27■□□□□ 0.2
PDX1P52945 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PDX1P52945 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.27■□□□□ 0.2
PDX1P52945 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PDX1P52945 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.27■□□□□ 0.2
PDX1P52945 KLK8-202ENST00000320838 456 ntTSL 5 BASIC16.27■□□□□ 0.2
PDX1P52945 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PDX1P52945 AC092474.2-201ENST00000424288 719 ntBASIC16.27■□□□□ 0.2
PDX1P52945 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC16.27■□□□□ 0.2
PDX1P52945 CNN2P2-201ENST00000443536 909 ntBASIC16.27■□□□□ 0.2
PDX1P52945 CNN2P3-201ENST00000450201 906 ntBASIC16.27■□□□□ 0.2
PDX1P52945 AC093214.1-201ENST00000511688 1107 ntBASIC16.27■□□□□ 0.2
PDX1P52945 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC16.27■□□□□ 0.2
PDX1P52945 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
PDX1P52945 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC16.27■□□□□ 0.2
PDX1P52945 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PDX1P52945 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
PDX1P52945 DUX4L17-201ENST00000557360 1267 ntBASIC16.27■□□□□ 0.2
PDX1P52945 AC138761.1-201ENST00000584393 385 ntBASIC16.27■□□□□ 0.2
PDX1P52945 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.27■□□□□ 0.2
PDX1P52945 AL136317.3-201ENST00000618497 906 ntBASIC16.27■□□□□ 0.2
PDX1P52945 AJ011932.1-201ENST00000621707 465 ntBASIC16.27■□□□□ 0.2
PDX1P52945 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.27■□□□□ 0.2
PDX1P52945 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC16.27■□□□□ 0.2
PDX1P52945 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
PDX1P52945 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.27■□□□□ 0.2
PDX1P52945 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
PDX1P52945 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PDX1P52945 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
PDX1P52945 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PDX1P52945 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PDX1P52945 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC16.27■□□□□ 0.19
PDX1P52945 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PDX1P52945 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PDX1P52945 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
PDX1P52945 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
PDX1P52945 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PDX1P52945 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PDX1P52945 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PDX1P52945 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PDX1P52945 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PDX1P52945 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PDX1P52945 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC16.26■□□□□ 0.19
PDX1P52945 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PDX1P52945 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
PDX1P52945 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PDX1P52945 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PDX1P52945 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
PDX1P52945 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PDX1P52945 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PDX1P52945 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PDX1P52945 AKAP8P1-201ENST00000434743 1349 ntBASIC16.26■□□□□ 0.19
PDX1P52945 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PDX1P52945 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.26■□□□□ 0.19
PDX1P52945 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PDX1P52945 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PDX1P52945 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC16.26■□□□□ 0.19
PDX1P52945 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC16.26■□□□□ 0.19
PDX1P52945 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.26■□□□□ 0.19
PDX1P52945 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
PDX1P52945 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC16.26■□□□□ 0.19
PDX1P52945 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC16.26■□□□□ 0.19
PDX1P52945 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PDX1P52945 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.26■□□□□ 0.19
PDX1P52945 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PDX1P52945 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PDX1P52945 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.26■□□□□ 0.19
PDX1P52945 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PDX1P52945 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PDX1P52945 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PDX1P52945 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
PDX1P52945 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PDX1P52945 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.26■□□□□ 0.19
PDX1P52945 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.26■□□□□ 0.19
PDX1P52945 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PDX1P52945 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
PDX1P52945 PCDHA12-202ENST00000613593 2588 ntBASIC16.26■□□□□ 0.19
PDX1P52945 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PDX1P52945 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.25■□□□□ 0.19
PDX1P52945 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PDX1P52945 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms