Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLCN3P51790 AL390955.2-201ENST00000603032 514 ntBASIC18.35■□□□□ 0.53
CLCN3P51790 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC18.35■□□□□ 0.53
CLCN3P51790 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC18.35■□□□□ 0.53
CLCN3P51790 AP001094.4-201ENST00000579008 2176 ntBASIC18.35■□□□□ 0.53
CLCN3P51790 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC18.35■□□□□ 0.53
CLCN3P51790 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLCN3P51790 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC18.35■□□□□ 0.53
CLCN3P51790 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CLCN3P51790 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CLCN3P51790 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLCN3P51790 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLCN3P51790 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
CLCN3P51790 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CLCN3P51790 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLCN3P51790 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLCN3P51790 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLCN3P51790 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLCN3P51790 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CLCN3P51790 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CLCN3P51790 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CLCN3P51790 AC142381.1-201ENST00000426099 345 ntBASIC18.34■□□□□ 0.53
CLCN3P51790 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC18.34■□□□□ 0.53
CLCN3P51790 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC18.34■□□□□ 0.53
CLCN3P51790 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC18.34■□□□□ 0.53
CLCN3P51790 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CLCN3P51790 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CLCN3P51790 MIR6080-201ENST00000617359 66 ntBASIC18.34■□□□□ 0.53
CLCN3P51790 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC18.34■□□□□ 0.53
CLCN3P51790 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.34■□□□□ 0.53
CLCN3P51790 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CLCN3P51790 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLCN3P51790 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
CLCN3P51790 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CLCN3P51790 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC18.34■□□□□ 0.53
CLCN3P51790 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC18.34■□□□□ 0.53
CLCN3P51790 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLCN3P51790 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC18.34■□□□□ 0.53
CLCN3P51790 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLCN3P51790 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.34■□□□□ 0.53
CLCN3P51790 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CLCN3P51790 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CLCN3P51790 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC18.33■□□□□ 0.53
CLCN3P51790 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
CLCN3P51790 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
CLCN3P51790 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CLCN3P51790 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CLCN3P51790 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CLCN3P51790 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CLCN3P51790 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CLCN3P51790 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CLCN3P51790 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC18.33■□□□□ 0.53
CLCN3P51790 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC18.33■□□□□ 0.53
CLCN3P51790 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CLCN3P51790 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CLCN3P51790 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CLCN3P51790 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC18.33■□□□□ 0.52
CLCN3P51790 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CLCN3P51790 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
CLCN3P51790 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CLCN3P51790 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CLCN3P51790 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CLCN3P51790 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CLCN3P51790 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CLCN3P51790 AC011467.4-201ENST00000594891 528 ntBASIC18.33■□□□□ 0.52
CLCN3P51790 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CLCN3P51790 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC18.33■□□□□ 0.52
CLCN3P51790 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CLCN3P51790 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC18.33■□□□□ 0.52
CLCN3P51790 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC18.33■□□□□ 0.52
CLCN3P51790 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
CLCN3P51790 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
CLCN3P51790 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.52
CLCN3P51790 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CLCN3P51790 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.52
CLCN3P51790 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CLCN3P51790 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
CLCN3P51790 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CLCN3P51790 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CLCN3P51790 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CLCN3P51790 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.32■□□□□ 0.52
CLCN3P51790 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC18.32■□□□□ 0.52
CLCN3P51790 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLCN3P51790 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLCN3P51790 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC18.32■□□□□ 0.52
CLCN3P51790 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLCN3P51790 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CLCN3P51790 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLCN3P51790 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CLCN3P51790 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC18.32■□□□□ 0.52
CLCN3P51790 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC18.32■□□□□ 0.52
CLCN3P51790 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CLCN3P51790 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
CLCN3P51790 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC18.32■□□□□ 0.52
CLCN3P51790 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CLCN3P51790 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC18.32■□□□□ 0.52
CLCN3P51790 KLF2P3-201ENST00000451977 1087 ntBASIC18.32■□□□□ 0.52
CLCN3P51790 AC125807.1-201ENST00000483097 614 ntBASIC18.32■□□□□ 0.52
CLCN3P51790 AC105233.2-201ENST00000523697 349 ntBASIC18.32■□□□□ 0.52
CLCN3P51790 AF228730.5-201ENST00000530288 346 ntBASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms