Protein–RNA interactions for Protein: P51788

CLCN2, Chloride channel protein 2, humanhuman

Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2P51788 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLCN2P51788 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
CLCN2P51788 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CLCN2P51788 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CLCN2P51788 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.3■□□□□ 0.2
CLCN2P51788 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLCN2P51788 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLCN2P51788 RPS2P28-201ENST00000314255 741 ntBASIC16.3■□□□□ 0.2
CLCN2P51788 AC003669.1-201ENST00000334569 611 ntBASIC16.3■□□□□ 0.2
CLCN2P51788 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CLCN2P51788 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CLCN2P51788 AL020989.1-201ENST00000422979 469 ntBASIC16.3■□□□□ 0.2
CLCN2P51788 MSRA-206ENST00000521209 814 ntTSL 3 BASIC16.3■□□□□ 0.2
CLCN2P51788 PENK-208ENST00000523051 772 ntTSL 5 BASIC16.3■□□□□ 0.2
CLCN2P51788 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CLCN2P51788 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC16.3■□□□□ 0.2
CLCN2P51788 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.3■□□□□ 0.2
CLCN2P51788 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC16.3■□□□□ 0.2
CLCN2P51788 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC16.3■□□□□ 0.2
CLCN2P51788 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLCN2P51788 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.3■□□□□ 0.2
CLCN2P51788 OR6D1P-203ENST00000641209 4860 ntBASIC16.3■□□□□ 0.2
CLCN2P51788 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.3■□□□□ 0.2
CLCN2P51788 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLCN2P51788 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLCN2P51788 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLCN2P51788 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.3■□□□□ 0.2
CLCN2P51788 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
CLCN2P51788 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.3■□□□□ 0.2
CLCN2P51788 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLCN2P51788 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLCN2P51788 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.3■□□□□ 0.2
CLCN2P51788 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLCN2P51788 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.29■□□□□ 0.2
CLCN2P51788 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLCN2P51788 AC079328.2-201ENST00000561241 3354 ntBASIC16.29■□□□□ 0.2
CLCN2P51788 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.29■□□□□ 0.2
CLCN2P51788 SIGLEC16-201ENST00000599858 1437 ntBASIC16.29■□□□□ 0.2
CLCN2P51788 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.29■□□□□ 0.2
CLCN2P51788 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLCN2P51788 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CLCN2P51788 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLCN2P51788 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CLCN2P51788 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLCN2P51788 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLCN2P51788 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLCN2P51788 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC16.29■□□□□ 0.2
CLCN2P51788 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CLCN2P51788 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLCN2P51788 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.29■□□□□ 0.2
CLCN2P51788 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CLCN2P51788 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.29■□□□□ 0.2
CLCN2P51788 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC16.29■□□□□ 0.2
CLCN2P51788 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CLCN2P51788 KLF4P1-201ENST00000412782 1185 ntBASIC16.29■□□□□ 0.2
CLCN2P51788 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CLCN2P51788 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC16.29■□□□□ 0.2
CLCN2P51788 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC16.29■□□□□ 0.2
CLCN2P51788 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC16.29■□□□□ 0.2
CLCN2P51788 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CLCN2P51788 AC021087.4-201ENST00000563761 564 ntBASIC16.29■□□□□ 0.2
CLCN2P51788 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC16.29■□□□□ 0.2
CLCN2P51788 AP001005.1-201ENST00000571755 1248 ntBASIC16.29■□□□□ 0.2
CLCN2P51788 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC16.29■□□□□ 0.2
CLCN2P51788 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CLCN2P51788 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC16.29■□□□□ 0.2
CLCN2P51788 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CLCN2P51788 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLCN2P51788 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLCN2P51788 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
CLCN2P51788 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC16.29■□□□□ 0.2
CLCN2P51788 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLCN2P51788 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CLCN2P51788 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLCN2P51788 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLCN2P51788 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CLCN2P51788 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLCN2P51788 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLCN2P51788 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
CLCN2P51788 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.29■□□□□ 0.2
CLCN2P51788 AC046185.3-201ENST00000623228 1824 ntBASIC16.29■□□□□ 0.2
CLCN2P51788 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLCN2P51788 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
CLCN2P51788 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CLCN2P51788 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLCN2P51788 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CLCN2P51788 AC022532.1-201ENST00000624563 1728 ntBASIC16.28■□□□□ 0.2
CLCN2P51788 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC16.28■□□□□ 0.2
CLCN2P51788 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLCN2P51788 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CLCN2P51788 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CLCN2P51788 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLCN2P51788 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.28■□□□□ 0.2
CLCN2P51788 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CLCN2P51788 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLCN2P51788 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLCN2P51788 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLCN2P51788 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CLCN2P51788 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CLCN2P51788 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms