Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RNF144AP50876 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC15.64■□□□□ 0.09
RNF144AP50876 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC15.64■□□□□ 0.09
RNF144AP50876 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC15.64■□□□□ 0.09
RNF144AP50876 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC15.64■□□□□ 0.09
RNF144AP50876 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RNF144AP50876 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RNF144AP50876 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC15.64■□□□□ 0.09
RNF144AP50876 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
RNF144AP50876 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC15.64■□□□□ 0.09
RNF144AP50876 LAGE3P1-201ENST00000425356 484 ntBASIC15.64■□□□□ 0.09
RNF144AP50876 AF186996.4-201ENST00000467186 377 ntBASIC15.64■□□□□ 0.09
RNF144AP50876 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC15.64■□□□□ 0.09
RNF144AP50876 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC15.64■□□□□ 0.09
RNF144AP50876 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RNF144AP50876 AP002469.2-201ENST00000531724 424 ntBASIC15.64■□□□□ 0.09
RNF144AP50876 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC15.64■□□□□ 0.09
RNF144AP50876 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
RNF144AP50876 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
RNF144AP50876 CALM3-211ENST00000598871 561 ntTSL 4 BASIC15.64■□□□□ 0.09
RNF144AP50876 TERC-201ENST00000602385 541 ntBASIC15.64■□□□□ 0.09
RNF144AP50876 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC15.64■□□□□ 0.09
RNF144AP50876 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RNF144AP50876 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
RNF144AP50876 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
RNF144AP50876 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RNF144AP50876 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC15.64■□□□□ 0.09
RNF144AP50876 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RNF144AP50876 FOS-208ENST00000555686 1496 ntTSL 2 BASIC15.64■□□□□ 0.09
RNF144AP50876 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
RNF144AP50876 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
RNF144AP50876 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC15.64■□□□□ 0.09
RNF144AP50876 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC15.64■□□□□ 0.09
RNF144AP50876 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RNF144AP50876 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC15.63■□□□□ 0.09
RNF144AP50876 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RNF144AP50876 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC15.63■□□□□ 0.09
RNF144AP50876 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RNF144AP50876 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
RNF144AP50876 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
RNF144AP50876 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RNF144AP50876 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
RNF144AP50876 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
RNF144AP50876 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RNF144AP50876 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RNF144AP50876 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RNF144AP50876 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
RNF144AP50876 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RNF144AP50876 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
RNF144AP50876 MED22-202ENST00000371999 987 ntTSL 3 BASIC15.63■□□□□ 0.09
RNF144AP50876 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
RNF144AP50876 AP002414.1-201ENST00000391405 1147 ntBASIC15.63■□□□□ 0.09
RNF144AP50876 KRT18P67-201ENST00000432816 1264 ntBASIC15.63■□□□□ 0.09
RNF144AP50876 AC018712.1-201ENST00000455767 687 ntBASIC15.63■□□□□ 0.09
RNF144AP50876 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC15.63■□□□□ 0.09
RNF144AP50876 AC092910.1-201ENST00000482027 1129 ntBASIC15.63■□□□□ 0.09
RNF144AP50876 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RNF144AP50876 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC15.63■□□□□ 0.09
RNF144AP50876 AC104692.2-201ENST00000603054 253 ntBASIC15.63■□□□□ 0.09
RNF144AP50876 MIR7706-201ENST00000613747 67 ntBASIC15.63■□□□□ 0.09
RNF144AP50876 VPS51-217ENST00000639871 243 ntTSL 5 BASIC15.63■□□□□ 0.09
RNF144AP50876 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC15.63■□□□□ 0.09
RNF144AP50876 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
RNF144AP50876 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
RNF144AP50876 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
RNF144AP50876 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RNF144AP50876 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RNF144AP50876 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RNF144AP50876 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RNF144AP50876 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC15.63■□□□□ 0.09
RNF144AP50876 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RNF144AP50876 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC15.63■□□□□ 0.09
RNF144AP50876 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RNF144AP50876 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC15.63■□□□□ 0.09
RNF144AP50876 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC15.62■□□□□ 0.09
RNF144AP50876 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RNF144AP50876 AC005052.1-201ENST00000625181 2492 ntBASIC15.62■□□□□ 0.09
RNF144AP50876 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC15.62■□□□□ 0.09
RNF144AP50876 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RNF144AP50876 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RNF144AP50876 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RNF144AP50876 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
RNF144AP50876 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC15.62■□□□□ 0.09
RNF144AP50876 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
RNF144AP50876 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
RNF144AP50876 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
RNF144AP50876 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
RNF144AP50876 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RNF144AP50876 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RNF144AP50876 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RNF144AP50876 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC15.62■□□□□ 0.09
RNF144AP50876 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
RNF144AP50876 ARTN-206ENST00000472435 402 ntTSL 3 BASIC15.62■□□□□ 0.09
RNF144AP50876 RPS15P9-201ENST00000494093 319 ntBASIC15.62■□□□□ 0.09
RNF144AP50876 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC15.62■□□□□ 0.09
RNF144AP50876 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC15.62■□□□□ 0.09
RNF144AP50876 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC15.62■□□□□ 0.09
RNF144AP50876 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC15.62■□□□□ 0.09
RNF144AP50876 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC15.62■□□□□ 0.09
RNF144AP50876 CYB561-216ENST00000582297 897 ntTSL 3 BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms