Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.48■□□□□ 0.39
MMP13P45452 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
MMP13P45452 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.47■□□□□ 0.39
MMP13P45452 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
MMP13P45452 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
MMP13P45452 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
MMP13P45452 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
MMP13P45452 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
MMP13P45452 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
MMP13P45452 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
MMP13P45452 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
MMP13P45452 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
MMP13P45452 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.47■□□□□ 0.39
MMP13P45452 MRPL3P1-201ENST00000400109 1033 ntBASIC17.47■□□□□ 0.39
MMP13P45452 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
MMP13P45452 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
MMP13P45452 ELK2BP-201ENST00000415014 1224 ntBASIC17.47■□□□□ 0.39
MMP13P45452 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.47■□□□□ 0.39
MMP13P45452 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC17.47■□□□□ 0.39
MMP13P45452 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.47■□□□□ 0.39
MMP13P45452 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC17.47■□□□□ 0.39
MMP13P45452 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC17.47■□□□□ 0.39
MMP13P45452 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC17.47■□□□□ 0.39
MMP13P45452 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC17.47■□□□□ 0.39
MMP13P45452 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
MMP13P45452 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
MMP13P45452 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
MMP13P45452 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
MMP13P45452 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC17.47■□□□□ 0.39
MMP13P45452 PAUPAR-201ENST00000630360 2965 ntBASIC17.47■□□□□ 0.39
MMP13P45452 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
MMP13P45452 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
MMP13P45452 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
MMP13P45452 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
MMP13P45452 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
MMP13P45452 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
MMP13P45452 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
MMP13P45452 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
MMP13P45452 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
MMP13P45452 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
MMP13P45452 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
MMP13P45452 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
MMP13P45452 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
MMP13P45452 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
MMP13P45452 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
MMP13P45452 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
MMP13P45452 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
MMP13P45452 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
MMP13P45452 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.46■□□□□ 0.39
MMP13P45452 AC006504.4-201ENST00000592118 1568 ntBASIC17.46■□□□□ 0.39
MMP13P45452 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
MMP13P45452 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
MMP13P45452 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
MMP13P45452 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
MMP13P45452 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC17.46■□□□□ 0.39
MMP13P45452 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
MMP13P45452 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
MMP13P45452 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC17.46■□□□□ 0.39
MMP13P45452 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.46■□□□□ 0.39
MMP13P45452 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC17.46■□□□□ 0.39
MMP13P45452 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC17.46■□□□□ 0.39
MMP13P45452 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
MMP13P45452 KRT18P27-201ENST00000427733 1299 ntBASIC17.46■□□□□ 0.39
MMP13P45452 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
MMP13P45452 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.46■□□□□ 0.39
MMP13P45452 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC17.46■□□□□ 0.39
MMP13P45452 AC009078.2-202ENST00000463353 338 ntBASIC17.46■□□□□ 0.39
MMP13P45452 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.46■□□□□ 0.39
MMP13P45452 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC17.46■□□□□ 0.39
MMP13P45452 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
MMP13P45452 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC17.46■□□□□ 0.39
MMP13P45452 AL662844.1-201ENST00000546340 181 ntBASIC17.46■□□□□ 0.39
MMP13P45452 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC17.46■□□□□ 0.39
MMP13P45452 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC17.46■□□□□ 0.39
MMP13P45452 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17.46■□□□□ 0.39
MMP13P45452 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC17.46■□□□□ 0.39
MMP13P45452 FAM215A-202ENST00000632077 792 ntBASIC17.46■□□□□ 0.39
MMP13P45452 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC17.46■□□□□ 0.39
MMP13P45452 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
MMP13P45452 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.46■□□□□ 0.39
MMP13P45452 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
MMP13P45452 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.39
MMP13P45452 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
MMP13P45452 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
MMP13P45452 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC17.46■□□□□ 0.39
MMP13P45452 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
MMP13P45452 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC17.46■□□□□ 0.38
MMP13P45452 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
MMP13P45452 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.46■□□□□ 0.38
MMP13P45452 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
MMP13P45452 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
MMP13P45452 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
MMP13P45452 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
MMP13P45452 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
MMP13P45452 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC17.45■□□□□ 0.38
MMP13P45452 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC17.45■□□□□ 0.38
MMP13P45452 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
MMP13P45452 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
MMP13P45452 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
MMP13P45452 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms