Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC15.37■□□□□ 0.05
RFC3P40938 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC15.37■□□□□ 0.05
RFC3P40938 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC15.37■□□□□ 0.05
RFC3P40938 AC116353.5-201ENST00000638148 1699 ntBASIC15.37■□□□□ 0.05
RFC3P40938 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RFC3P40938 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC15.37■□□□□ 0.05
RFC3P40938 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
RFC3P40938 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
RFC3P40938 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RFC3P40938 GOLGA6L17P-202ENST00000614358 1398 ntBASIC15.36■□□□□ 0.05
RFC3P40938 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RFC3P40938 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
RFC3P40938 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
RFC3P40938 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC15.36■□□□□ 0.05
RFC3P40938 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RFC3P40938 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC15.36■□□□□ 0.05
RFC3P40938 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RFC3P40938 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
RFC3P40938 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
RFC3P40938 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RFC3P40938 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RFC3P40938 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC15.36■□□□□ 0.05
RFC3P40938 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RFC3P40938 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RFC3P40938 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RFC3P40938 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
RFC3P40938 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RFC3P40938 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC15.36■□□□□ 0.05
RFC3P40938 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RFC3P40938 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RFC3P40938 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RFC3P40938 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RFC3P40938 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
RFC3P40938 AL139400.1-201ENST00000366220 510 ntBASIC15.36■□□□□ 0.05
RFC3P40938 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC15.36■□□□□ 0.05
RFC3P40938 AL355306.1-201ENST00000415580 579 ntBASIC15.36■□□□□ 0.05
RFC3P40938 AL671277.1-201ENST00000429656 993 ntBASIC15.36■□□□□ 0.05
RFC3P40938 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC15.36■□□□□ 0.05
RFC3P40938 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC15.36■□□□□ 0.05
RFC3P40938 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC15.36■□□□□ 0.05
RFC3P40938 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
RFC3P40938 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RFC3P40938 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC15.36■□□□□ 0.05
RFC3P40938 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC15.36■□□□□ 0.05
RFC3P40938 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
RFC3P40938 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RFC3P40938 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC15.36■□□□□ 0.05
RFC3P40938 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
RFC3P40938 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC15.36■□□□□ 0.05
RFC3P40938 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RFC3P40938 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RFC3P40938 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
RFC3P40938 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
RFC3P40938 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC15.36■□□□□ 0.05
RFC3P40938 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RFC3P40938 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RFC3P40938 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
RFC3P40938 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RFC3P40938 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC15.35■□□□□ 0.05
RFC3P40938 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RFC3P40938 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC15.35■□□□□ 0.05
RFC3P40938 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
RFC3P40938 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RFC3P40938 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RFC3P40938 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RFC3P40938 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RFC3P40938 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RFC3P40938 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
RFC3P40938 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RFC3P40938 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RFC3P40938 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RFC3P40938 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC15.35■□□□□ 0.05
RFC3P40938 ADH5P3-201ENST00000433842 1137 ntBASIC15.35■□□□□ 0.05
RFC3P40938 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC15.35■□□□□ 0.05
RFC3P40938 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
RFC3P40938 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RFC3P40938 KRT8P48-201ENST00000515599 1220 ntBASIC15.35■□□□□ 0.05
RFC3P40938 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC15.35■□□□□ 0.05
RFC3P40938 AC005412.3-201ENST00000580309 715 ntBASIC15.35■□□□□ 0.05
RFC3P40938 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC15.35■□□□□ 0.05
RFC3P40938 METTL23-205ENST00000588302 925 ntTSL 5 BASIC15.35■□□□□ 0.05
RFC3P40938 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC15.35■□□□□ 0.05
RFC3P40938 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RFC3P40938 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC15.35■□□□□ 0.05
RFC3P40938 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RFC3P40938 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC15.35■□□□□ 0.05
RFC3P40938 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
RFC3P40938 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC15.35■□□□□ 0.05
RFC3P40938 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
RFC3P40938 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
RFC3P40938 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
RFC3P40938 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
RFC3P40938 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RFC3P40938 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC15.35■□□□□ 0.05
RFC3P40938 SLC22A20-204ENST00000530038 1673 ntBASIC15.35■□□□□ 0.05
RFC3P40938 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RFC3P40938 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
RFC3P40938 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC15.34■□□□□ 0.05
RFC3P40938 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RFC3P40938 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms