Protein–RNA interactions for Protein: P35712

SOX6, Transcription factor SOX-6, humanhuman

Predictions only

Length 828 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6P35712 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SOX6P35712 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC15.11■□□□□ 0.01
SOX6P35712 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC15.11■□□□□ 0.01
SOX6P35712 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SOX6P35712 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
SOX6P35712 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SOX6P35712 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC15.1■□□□□ 0.01
SOX6P35712 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SOX6P35712 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC15.1■□□□□ 0.01
SOX6P35712 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SOX6P35712 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SOX6P35712 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SOX6P35712 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC15.1■□□□□ 0.01
SOX6P35712 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SOX6P35712 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SOX6P35712 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SOX6P35712 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
SOX6P35712 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SOX6P35712 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC15.1■□□□□ 0.01
SOX6P35712 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SOX6P35712 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.1■□□□□ 0.01
SOX6P35712 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC15.1■□□□□ 0.01
SOX6P35712 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC15.1■□□□□ 0.01
SOX6P35712 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SOX6P35712 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SOX6P35712 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SOX6P35712 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC15.1■□□□□ 0.01
SOX6P35712 MIR1238-201ENST00000408483 83 ntBASIC15.1■□□□□ 0.01
SOX6P35712 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SOX6P35712 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC15.1■□□□□ 0.01
SOX6P35712 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
SOX6P35712 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC15.1■□□□□ 0.01
SOX6P35712 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC15.1■□□□□ 0.01
SOX6P35712 AP005242.2-201ENST00000580065 1175 ntBASIC15.1■□□□□ 0.01
SOX6P35712 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC15.1■□□□□ 0.01
SOX6P35712 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC15.1■□□□□ 0.01
SOX6P35712 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC15.1■□□□□ 0.01
SOX6P35712 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
SOX6P35712 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SOX6P35712 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SOX6P35712 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SOX6P35712 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SOX6P35712 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SOX6P35712 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SOX6P35712 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SOX6P35712 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SOX6P35712 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
SOX6P35712 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SOX6P35712 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC15.1■□□□□ 0.01
SOX6P35712 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SOX6P35712 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SOX6P35712 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SOX6P35712 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SOX6P35712 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
SOX6P35712 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC15.09■□□□□ 0.01
SOX6P35712 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC15.09■□□□□ 0.01
SOX6P35712 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SOX6P35712 TNRC18P2-201ENST00000417666 2714 ntBASIC15.09■□□□□ 0.01
SOX6P35712 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SOX6P35712 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
SOX6P35712 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC15.09■□□□□ 0.01
SOX6P35712 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC15.09■□□□□ 0.01
SOX6P35712 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
SOX6P35712 PBK-203ENST00000522944 1499 ntTSL 2 BASIC15.09■□□□□ 0.01
SOX6P35712 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SOX6P35712 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SOX6P35712 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SOX6P35712 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
SOX6P35712 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SOX6P35712 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
SOX6P35712 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SOX6P35712 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC15.09■□□□□ 0.01
SOX6P35712 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC15.09■□□□□ 0.01
SOX6P35712 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC15.09■□□□□ 0.01
SOX6P35712 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC15.09■□□□□ 0.01
SOX6P35712 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SOX6P35712 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC15.09■□□□□ 0.01
SOX6P35712 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC15.09■□□□□ 0.01
SOX6P35712 FITM1-202ENST00000559294 800 ntBASIC15.09■□□□□ 0.01
SOX6P35712 TMED1-207ENST00000591695 809 ntTSL 5 BASIC15.09■□□□□ 0.01
SOX6P35712 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SOX6P35712 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SOX6P35712 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SOX6P35712 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC15.09■□□□□ 0.01
SOX6P35712 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SOX6P35712 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SOX6P35712 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
SOX6P35712 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
SOX6P35712 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
SOX6P35712 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC15.09■□□□□ 0.01
SOX6P35712 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SOX6P35712 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
SOX6P35712 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SOX6P35712 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SOX6P35712 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC15.09■□□□□ 0.01
SOX6P35712 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SOX6P35712 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SOX6P35712 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
SOX6P35712 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
SOX6P35712 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms