Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CTNNA1P35221 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
CTNNA1P35221 AC006538.1-201ENST00000567905 1585 ntBASIC17.77■□□□□ 0.44
CTNNA1P35221 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.77■□□□□ 0.44
CTNNA1P35221 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.77■□□□□ 0.44
CTNNA1P35221 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
CTNNA1P35221 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC17.77■□□□□ 0.43
CTNNA1P35221 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
CTNNA1P35221 AC243591.1-201ENST00000452967 1364 ntBASIC17.77■□□□□ 0.43
CTNNA1P35221 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CTNNA1P35221 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC17.77■□□□□ 0.43
CTNNA1P35221 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CTNNA1P35221 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
CTNNA1P35221 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.43
CTNNA1P35221 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CTNNA1P35221 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CTNNA1P35221 AC105917.1-201ENST00000506637 2539 ntBASIC17.76■□□□□ 0.43
CTNNA1P35221 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTNNA1P35221 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CTNNA1P35221 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17.76■□□□□ 0.43
CTNNA1P35221 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
CTNNA1P35221 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
CTNNA1P35221 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTNNA1P35221 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC17.76■□□□□ 0.43
CTNNA1P35221 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CTNNA1P35221 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CTNNA1P35221 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
CTNNA1P35221 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.76■□□□□ 0.43
CTNNA1P35221 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTNNA1P35221 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CTNNA1P35221 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CTNNA1P35221 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CTNNA1P35221 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CTNNA1P35221 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.76■□□□□ 0.43
CTNNA1P35221 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTNNA1P35221 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC17.76■□□□□ 0.43
CTNNA1P35221 PRYP5-201ENST00000451909 266 ntBASIC17.76■□□□□ 0.43
CTNNA1P35221 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC17.76■□□□□ 0.43
CTNNA1P35221 FICD-205ENST00000552758 603 ntTSL 2 BASIC17.76■□□□□ 0.43
CTNNA1P35221 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC17.76■□□□□ 0.43
CTNNA1P35221 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.76■□□□□ 0.43
CTNNA1P35221 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTNNA1P35221 TERC-201ENST00000602385 541 ntBASIC17.76■□□□□ 0.43
CTNNA1P35221 AC092119.3-201ENST00000612618 583 ntBASIC17.76■□□□□ 0.43
CTNNA1P35221 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CTNNA1P35221 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC17.76■□□□□ 0.43
CTNNA1P35221 AL358472.4-201ENST00000633140 710 ntBASIC17.76■□□□□ 0.43
CTNNA1P35221 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC17.76■□□□□ 0.43
CTNNA1P35221 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTNNA1P35221 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTNNA1P35221 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTNNA1P35221 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.76■□□□□ 0.43
CTNNA1P35221 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CTNNA1P35221 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CTNNA1P35221 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC17.76■□□□□ 0.43
CTNNA1P35221 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC17.76■□□□□ 0.43
CTNNA1P35221 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTNNA1P35221 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC17.76■□□□□ 0.43
CTNNA1P35221 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
CTNNA1P35221 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTNNA1P35221 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTNNA1P35221 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CTNNA1P35221 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTNNA1P35221 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC17.76■□□□□ 0.43
CTNNA1P35221 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CTNNA1P35221 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTNNA1P35221 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTNNA1P35221 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CTNNA1P35221 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CTNNA1P35221 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CTNNA1P35221 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC17.75■□□□□ 0.43
CTNNA1P35221 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.75■□□□□ 0.43
CTNNA1P35221 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CTNNA1P35221 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
CTNNA1P35221 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC17.75■□□□□ 0.43
CTNNA1P35221 AP005117.1-201ENST00000584346 1413 ntBASIC17.75■□□□□ 0.43
CTNNA1P35221 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CTNNA1P35221 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CTNNA1P35221 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CTNNA1P35221 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CTNNA1P35221 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
CTNNA1P35221 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CTNNA1P35221 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CTNNA1P35221 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CTNNA1P35221 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC17.75■□□□□ 0.43
CTNNA1P35221 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CTNNA1P35221 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
CTNNA1P35221 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC17.75■□□□□ 0.43
CTNNA1P35221 AL591684.3-201ENST00000605187 298 ntBASIC17.75■□□□□ 0.43
CTNNA1P35221 AP001269.4-201ENST00000609611 512 ntBASIC17.75■□□□□ 0.43
CTNNA1P35221 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CTNNA1P35221 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
CTNNA1P35221 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CTNNA1P35221 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
CTNNA1P35221 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CTNNA1P35221 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
CTNNA1P35221 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC17.75■□□□□ 0.43
CTNNA1P35221 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CTNNA1P35221 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CTNNA1P35221 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms