Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
HOXC13P31276 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HOXC13P31276 AQP6-203ENST00000551733 849 ntTSL 3 BASIC17.29■□□□□ 0.36
HOXC13P31276 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC17.29■□□□□ 0.36
HOXC13P31276 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HOXC13P31276 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC17.29■□□□□ 0.36
HOXC13P31276 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC17.29■□□□□ 0.36
HOXC13P31276 AP001350.2-201ENST00000625104 1094 ntBASIC17.29■□□□□ 0.36
HOXC13P31276 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC17.29■□□□□ 0.36
HOXC13P31276 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC17.29■□□□□ 0.36
HOXC13P31276 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
HOXC13P31276 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HOXC13P31276 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HOXC13P31276 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
HOXC13P31276 AC009053.2-201ENST00000563701 2365 ntBASIC17.29■□□□□ 0.36
HOXC13P31276 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
HOXC13P31276 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
HOXC13P31276 NKILA-202ENST00000614771 2598 ntBASIC17.29■□□□□ 0.36
HOXC13P31276 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
HOXC13P31276 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HOXC13P31276 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HOXC13P31276 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HOXC13P31276 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
HOXC13P31276 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
HOXC13P31276 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HOXC13P31276 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HOXC13P31276 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HOXC13P31276 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HOXC13P31276 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.28■□□□□ 0.36
HOXC13P31276 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC17.28■□□□□ 0.36
HOXC13P31276 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
HOXC13P31276 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.28■□□□□ 0.36
HOXC13P31276 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
HOXC13P31276 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HOXC13P31276 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HOXC13P31276 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
HOXC13P31276 AC055876.3-201ENST00000431496 288 ntBASIC17.28■□□□□ 0.36
HOXC13P31276 AC002472.2-201ENST00000442739 958 ntBASIC17.28■□□□□ 0.36
HOXC13P31276 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC17.28■□□□□ 0.36
HOXC13P31276 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
HOXC13P31276 AC069335.1-201ENST00000489972 472 ntBASIC17.28■□□□□ 0.36
HOXC13P31276 AC112191.1-201ENST00000523689 701 ntBASIC17.28■□□□□ 0.36
HOXC13P31276 PUDP-206ENST00000540122 825 ntTSL 2 BASIC17.28■□□□□ 0.36
HOXC13P31276 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
HOXC13P31276 MIR3909-201ENST00000579518 119 ntBASIC17.28■□□□□ 0.36
HOXC13P31276 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC17.28■□□□□ 0.36
HOXC13P31276 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC17.28■□□□□ 0.36
HOXC13P31276 AC138649.4-201ENST00000612222 287 ntBASIC17.28■□□□□ 0.36
HOXC13P31276 WT1-AS_2.1-201ENST00000613208 137 ntBASIC17.28■□□□□ 0.36
HOXC13P31276 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HOXC13P31276 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HOXC13P31276 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HOXC13P31276 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HOXC13P31276 KRT8P39-201ENST00000396270 1433 ntBASIC17.28■□□□□ 0.36
HOXC13P31276 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HOXC13P31276 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.28■□□□□ 0.36
HOXC13P31276 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HOXC13P31276 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HOXC13P31276 AC006538.1-201ENST00000567905 1585 ntBASIC17.28■□□□□ 0.36
HOXC13P31276 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC17.28■□□□□ 0.36
HOXC13P31276 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.27■□□□□ 0.36
HOXC13P31276 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.27■□□□□ 0.36
HOXC13P31276 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
HOXC13P31276 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
HOXC13P31276 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HOXC13P31276 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.27■□□□□ 0.36
HOXC13P31276 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.36
HOXC13P31276 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HOXC13P31276 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HOXC13P31276 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
HOXC13P31276 HLA-A-202ENST00000376806 1854 ntBASIC17.27■□□□□ 0.36
HOXC13P31276 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
HOXC13P31276 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.27■□□□□ 0.36
HOXC13P31276 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HOXC13P31276 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HOXC13P31276 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
HOXC13P31276 AL592309.1-201ENST00000443127 649 ntBASIC17.27■□□□□ 0.36
HOXC13P31276 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC17.27■□□□□ 0.36
HOXC13P31276 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HOXC13P31276 MTRF1LP2-201ENST00000506027 1122 ntBASIC17.27■□□□□ 0.36
HOXC13P31276 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC17.27■□□□□ 0.36
HOXC13P31276 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC17.27■□□□□ 0.36
HOXC13P31276 AC051619.7-201ENST00000568314 623 ntBASIC17.27■□□□□ 0.36
HOXC13P31276 AJ011932.1-201ENST00000621707 465 ntBASIC17.27■□□□□ 0.36
HOXC13P31276 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC17.27■□□□□ 0.36
HOXC13P31276 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
HOXC13P31276 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC17.27■□□□□ 0.36
HOXC13P31276 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.27■□□□□ 0.36
HOXC13P31276 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC17.27■□□□□ 0.36
HOXC13P31276 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.27■□□□□ 0.35
HOXC13P31276 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
HOXC13P31276 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
HOXC13P31276 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
HOXC13P31276 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.27■□□□□ 0.35
HOXC13P31276 FLJ38576-201ENST00000623820 2459 ntBASIC17.27■□□□□ 0.35
HOXC13P31276 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
HOXC13P31276 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
HOXC13P31276 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
HOXC13P31276 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
HOXC13P31276 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.27■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms