Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NR4A1P22736 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
NR4A1P22736 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NR4A1P22736 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NR4A1P22736 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NR4A1P22736 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NR4A1P22736 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
NR4A1P22736 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NR4A1P22736 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
NR4A1P22736 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NR4A1P22736 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC15.65■□□□□ 0.1
NR4A1P22736 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NR4A1P22736 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NR4A1P22736 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NR4A1P22736 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NR4A1P22736 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NR4A1P22736 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
NR4A1P22736 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
NR4A1P22736 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
NR4A1P22736 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NR4A1P22736 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NR4A1P22736 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NR4A1P22736 DDT-203ENST00000403754 569 ntTSL 3 BASIC15.65■□□□□ 0.1
NR4A1P22736 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
NR4A1P22736 DDT-206ENST00000430101 573 ntTSL 2 BASIC15.65■□□□□ 0.1
NR4A1P22736 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NR4A1P22736 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC15.65■□□□□ 0.1
NR4A1P22736 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC15.65■□□□□ 0.1
NR4A1P22736 GUSBP12-201ENST00000513727 720 ntBASIC15.65■□□□□ 0.1
NR4A1P22736 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC15.65■□□□□ 0.1
NR4A1P22736 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC15.65■□□□□ 0.1
NR4A1P22736 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC15.65■□□□□ 0.1
NR4A1P22736 NPAP1P7-201ENST00000613027 823 ntBASIC15.65■□□□□ 0.1
NR4A1P22736 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NR4A1P22736 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC15.65■□□□□ 0.1
NR4A1P22736 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC15.65■□□□□ 0.1
NR4A1P22736 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
NR4A1P22736 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
NR4A1P22736 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
NR4A1P22736 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
NR4A1P22736 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC15.65■□□□□ 0.1
NR4A1P22736 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NR4A1P22736 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC15.65■□□□□ 0.1
NR4A1P22736 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.65■□□□□ 0.1
NR4A1P22736 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.1
NR4A1P22736 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
NR4A1P22736 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC15.64■□□□□ 0.09
NR4A1P22736 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NR4A1P22736 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.64■□□□□ 0.09
NR4A1P22736 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.64■□□□□ 0.09
NR4A1P22736 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NR4A1P22736 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
NR4A1P22736 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC15.64■□□□□ 0.09
NR4A1P22736 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
NR4A1P22736 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
NR4A1P22736 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC15.64■□□□□ 0.09
NR4A1P22736 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC15.64■□□□□ 0.09
NR4A1P22736 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
NR4A1P22736 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NR4A1P22736 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC15.64■□□□□ 0.09
NR4A1P22736 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC15.64■□□□□ 0.09
NR4A1P22736 IGHV3-41-201ENST00000613121 348 ntBASIC15.64■□□□□ 0.09
NR4A1P22736 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC15.64■□□□□ 0.09
NR4A1P22736 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC15.64■□□□□ 0.09
NR4A1P22736 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
NR4A1P22736 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC15.64■□□□□ 0.09
NR4A1P22736 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
NR4A1P22736 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
NR4A1P22736 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
NR4A1P22736 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NR4A1P22736 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
NR4A1P22736 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
NR4A1P22736 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NR4A1P22736 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC15.64■□□□□ 0.09
NR4A1P22736 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
NR4A1P22736 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NR4A1P22736 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
NR4A1P22736 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NR4A1P22736 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NR4A1P22736 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
NR4A1P22736 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NR4A1P22736 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
NR4A1P22736 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
NR4A1P22736 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
NR4A1P22736 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NR4A1P22736 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NR4A1P22736 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC15.63■□□□□ 0.09
NR4A1P22736 AC126177.1-201ENST00000547829 2218 ntBASIC15.63■□□□□ 0.09
NR4A1P22736 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
NR4A1P22736 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NR4A1P22736 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NR4A1P22736 ALOX12P2-203ENST00000570921 1945 ntBASIC15.63■□□□□ 0.09
NR4A1P22736 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC15.63■□□□□ 0.09
NR4A1P22736 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC15.63■□□□□ 0.09
NR4A1P22736 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
NR4A1P22736 SLC25A1P3-201ENST00000395415 828 ntBASIC15.63■□□□□ 0.09
NR4A1P22736 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC15.63■□□□□ 0.09
NR4A1P22736 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC15.63■□□□□ 0.09
NR4A1P22736 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC15.63■□□□□ 0.09
NR4A1P22736 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 8.2 ms