Protein–RNA interactions for Protein: P21817

RYR1, Ryanodine receptor 1, humanhuman

Predictions only

Length 5,038 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RYR1P21817 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
RYR1P21817 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC10.23□□□□□ -0.77
RYR1P21817 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC10.23□□□□□ -0.77
RYR1P21817 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
RYR1P21817 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC10.23□□□□□ -0.77
RYR1P21817 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
RYR1P21817 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
RYR1P21817 LYSMD4-203ENST00000378904 2122 ntBASIC10.23□□□□□ -0.77
RYR1P21817 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
RYR1P21817 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
RYR1P21817 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
RYR1P21817 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC10.23□□□□□ -0.77
RYR1P21817 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
RYR1P21817 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC10.23□□□□□ -0.77
RYR1P21817 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
RYR1P21817 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
RYR1P21817 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
RYR1P21817 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
RYR1P21817 RN7SL399P-201ENST00000471648 279 ntBASIC10.23□□□□□ -0.77
RYR1P21817 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC10.23□□□□□ -0.77
RYR1P21817 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC10.23□□□□□ -0.77
RYR1P21817 AL353622.2-201ENST00000605846 425 ntBASIC10.23□□□□□ -0.77
RYR1P21817 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
RYR1P21817 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC10.23□□□□□ -0.77
RYR1P21817 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
RYR1P21817 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
RYR1P21817 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC10.23□□□□□ -0.77
RYR1P21817 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
RYR1P21817 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
RYR1P21817 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC10.22□□□□□ -0.77
RYR1P21817 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
RYR1P21817 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
RYR1P21817 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
RYR1P21817 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
RYR1P21817 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC10.22□□□□□ -0.77
RYR1P21817 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC10.22□□□□□ -0.77
RYR1P21817 APOA1-205ENST00000375329 927 ntTSL 2 BASIC10.22□□□□□ -0.77
RYR1P21817 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
RYR1P21817 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC10.22□□□□□ -0.77
RYR1P21817 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
RYR1P21817 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC10.22□□□□□ -0.77
RYR1P21817 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC10.22□□□□□ -0.77
RYR1P21817 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
RYR1P21817 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
RYR1P21817 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
RYR1P21817 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
RYR1P21817 FRMD8P1-201ENST00000440433 1524 ntBASIC10.22□□□□□ -0.77
RYR1P21817 MGST3-203ENST00000367885 680 ntTSL 2 BASIC10.22□□□□□ -0.77
RYR1P21817 IMP3P2-201ENST00000489760 475 ntBASIC10.22□□□□□ -0.77
RYR1P21817 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
RYR1P21817 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC10.22□□□□□ -0.77
RYR1P21817 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
RYR1P21817 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
RYR1P21817 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC10.22□□□□□ -0.77
RYR1P21817 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC10.22□□□□□ -0.77
RYR1P21817 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
RYR1P21817 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
RYR1P21817 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
RYR1P21817 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC10.22□□□□□ -0.77
RYR1P21817 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC10.22□□□□□ -0.77
RYR1P21817 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
RYR1P21817 ZBTB12BP-201ENST00000314232 1122 ntBASIC10.22□□□□□ -0.77
RYR1P21817 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC10.22□□□□□ -0.77
RYR1P21817 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC10.22□□□□□ -0.77
RYR1P21817 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC10.22□□□□□ -0.77
RYR1P21817 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC10.22□□□□□ -0.77
RYR1P21817 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC10.22□□□□□ -0.77
RYR1P21817 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC10.22□□□□□ -0.77
RYR1P21817 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC10.22□□□□□ -0.77
RYR1P21817 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
RYR1P21817 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
RYR1P21817 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
RYR1P21817 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
RYR1P21817 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
RYR1P21817 AC245884.1-201ENST00000457113 529 ntTSL 3 BASIC10.22□□□□□ -0.77
RYR1P21817 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC10.22□□□□□ -0.77
RYR1P21817 GNRHR2-203ENST00000581100 1187 ntBASIC10.22□□□□□ -0.77
RYR1P21817 AC133539.2-201ENST00000604757 467 ntBASIC10.22□□□□□ -0.77
RYR1P21817 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.77
RYR1P21817 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC10.21□□□□□ -0.77
RYR1P21817 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
RYR1P21817 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
RYR1P21817 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC10.21□□□□□ -0.77
RYR1P21817 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
RYR1P21817 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC10.21□□□□□ -0.77
RYR1P21817 SERBP1P2-201ENST00000436888 1164 ntBASIC10.21□□□□□ -0.77
RYR1P21817 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC10.21□□□□□ -0.77
RYR1P21817 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
RYR1P21817 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC10.21□□□□□ -0.77
RYR1P21817 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC10.21□□□□□ -0.77
RYR1P21817 CSH2-202ENST00000345366 598 ntTSL 5 BASIC10.21□□□□□ -0.77
RYR1P21817 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC10.21□□□□□ -0.77
RYR1P21817 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC10.21□□□□□ -0.77
RYR1P21817 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.77
RYR1P21817 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC10.21□□□□□ -0.77
RYR1P21817 AC061975.2-201ENST00000581722 295 ntBASIC10.21□□□□□ -0.77
RYR1P21817 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
RYR1P21817 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
RYR1P21817 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
RYR1P21817 REXO1L9P-201ENST00000604264 2108 ntBASIC10.21□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms