Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RAB4AP20338 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
RAB4AP20338 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
RAB4AP20338 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
RAB4AP20338 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
RAB4AP20338 LAMA3-202ENST00000313654 10661 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
RAB4AP20338 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
RAB4AP20338 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
RAB4AP20338 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
RAB4AP20338 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RAB4AP20338 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
RAB4AP20338 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
RAB4AP20338 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RAB4AP20338 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
RAB4AP20338 DAAM2-202ENST00000398904 6224 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
RAB4AP20338 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
RAB4AP20338 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC12.91□□□□□ -0.34
RAB4AP20338 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
RAB4AP20338 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC12.91□□□□□ -0.34
RAB4AP20338 NALCN-AS1-201ENST00000457843 2846 ntTSL 2 BASIC12.91□□□□□ -0.34
RAB4AP20338 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC12.91□□□□□ -0.34
RAB4AP20338 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
RAB4AP20338 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC12.91□□□□□ -0.34
RAB4AP20338 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RAB4AP20338 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
RAB4AP20338 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
RAB4AP20338 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
RAB4AP20338 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
RAB4AP20338 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC12.91□□□□□ -0.34
RAB4AP20338 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
RAB4AP20338 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RAB4AP20338 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
RAB4AP20338 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
RAB4AP20338 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
RAB4AP20338 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC12.91□□□□□ -0.34
RAB4AP20338 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
RAB4AP20338 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
RAB4AP20338 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC12.91□□□□□ -0.34
RAB4AP20338 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC12.91□□□□□ -0.34
RAB4AP20338 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC12.91□□□□□ -0.34
RAB4AP20338 AC133681.1-201ENST00000465482 601 ntBASIC12.91□□□□□ -0.34
RAB4AP20338 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
RAB4AP20338 AP003097.1-201ENST00000530657 1135 ntBASIC12.91□□□□□ -0.34
RAB4AP20338 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC12.91□□□□□ -0.34
RAB4AP20338 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC12.91□□□□□ -0.34
RAB4AP20338 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
RAB4AP20338 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC12.91□□□□□ -0.34
RAB4AP20338 AC124016.1-201ENST00000609552 612 ntBASIC12.91□□□□□ -0.34
RAB4AP20338 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RAB4AP20338 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RAB4AP20338 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RAB4AP20338 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
RAB4AP20338 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC12.91□□□□□ -0.34
RAB4AP20338 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
RAB4AP20338 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC12.91□□□□□ -0.34
RAB4AP20338 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RAB4AP20338 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
RAB4AP20338 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RAB4AP20338 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC12.91□□□□□ -0.34
RAB4AP20338 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RAB4AP20338 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RAB4AP20338 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RAB4AP20338 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
RAB4AP20338 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
RAB4AP20338 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
RAB4AP20338 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RAB4AP20338 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC12.91□□□□□ -0.34
RAB4AP20338 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
RAB4AP20338 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
RAB4AP20338 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
RAB4AP20338 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC12.9□□□□□ -0.34
RAB4AP20338 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC12.9□□□□□ -0.34
RAB4AP20338 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC12.9□□□□□ -0.34
RAB4AP20338 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC12.9□□□□□ -0.34
RAB4AP20338 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC12.9□□□□□ -0.34
RAB4AP20338 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
RAB4AP20338 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
RAB4AP20338 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
RAB4AP20338 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
RAB4AP20338 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
RAB4AP20338 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
RAB4AP20338 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
RAB4AP20338 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
RAB4AP20338 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
RAB4AP20338 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
RAB4AP20338 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
RAB4AP20338 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
RAB4AP20338 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC12.9□□□□□ -0.34
RAB4AP20338 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
RAB4AP20338 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
RAB4AP20338 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
RAB4AP20338 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
RAB4AP20338 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
RAB4AP20338 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
RAB4AP20338 AL353807.1-201ENST00000427475 662 ntBASIC12.9□□□□□ -0.34
RAB4AP20338 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC12.9□□□□□ -0.34
RAB4AP20338 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC12.9□□□□□ -0.34
RAB4AP20338 FDX2-207ENST00000494368 584 ntTSL 4 BASIC12.9□□□□□ -0.34
RAB4AP20338 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC12.9□□□□□ -0.34
RAB4AP20338 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC12.9□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms