Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC28.15■■■□□ 2.1
CFTRP13569 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC28.15■■■□□ 2.1
CFTRP13569 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC28.15■■■□□ 2.1
CFTRP13569 RN7SL219P-201ENST00000582872 296 ntBASIC28.15■■■□□ 2.1
CFTRP13569 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC28.15■■■□□ 2.1
CFTRP13569 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC28.15■■■□□ 2.1
CFTRP13569 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC28.15■■■□□ 2.1
CFTRP13569 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC28.15■■■□□ 2.1
CFTRP13569 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC28.15■■■□□ 2.1
CFTRP13569 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC28.15■■■□□ 2.1
CFTRP13569 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
CFTRP13569 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
CFTRP13569 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
CFTRP13569 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC28.15■■■□□ 2.1
CFTRP13569 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
CFTRP13569 EEF1DP4-201ENST00000446006 880 ntBASIC28.15■■■□□ 2.1
CFTRP13569 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
CFTRP13569 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
CFTRP13569 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
CFTRP13569 CYP4F24P-201ENST00000586049 1580 ntBASIC28.14■■■□□ 2.1
CFTRP13569 AL512652.2-201ENST00000625156 1716 ntBASIC28.14■■■□□ 2.1
CFTRP13569 AMT-232ENST00000636199 1546 ntTSL 5 BASIC28.14■■■□□ 2.1
CFTRP13569 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC28.14■■■□□ 2.1
CFTRP13569 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC28.14■■■□□ 2.1
CFTRP13569 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
CFTRP13569 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC28.14■■■□□ 2.1
CFTRP13569 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC28.14■■■□□ 2.09
CFTRP13569 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC28.14■■■□□ 2.09
CFTRP13569 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC28.14■■■□□ 2.09
CFTRP13569 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC28.14■■■□□ 2.09
CFTRP13569 ACTG1P3-201ENST00000431775 1114 ntBASIC28.14■■■□□ 2.09
CFTRP13569 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC28.14■■■□□ 2.09
CFTRP13569 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC28.14■■■□□ 2.09
CFTRP13569 TPI1-206ENST00000488464 791 ntTSL 5 BASIC28.14■■■□□ 2.09
CFTRP13569 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC28.14■■■□□ 2.09
CFTRP13569 AP000812.2-201ENST00000538934 718 ntBASIC28.14■■■□□ 2.09
CFTRP13569 APRT-204ENST00000563655 709 ntTSL 5 BASIC28.14■■■□□ 2.09
CFTRP13569 BRI3BPP1-201ENST00000594224 787 ntBASIC28.14■■■□□ 2.09
CFTRP13569 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC28.14■■■□□ 2.09
CFTRP13569 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC28.13■■■□□ 2.09
CFTRP13569 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC28.13■■■□□ 2.09
CFTRP13569 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
CFTRP13569 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC28.13■■■□□ 2.09
CFTRP13569 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
CFTRP13569 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
CFTRP13569 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC28.13■■■□□ 2.09
CFTRP13569 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC28.13■■■□□ 2.09
CFTRP13569 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
CFTRP13569 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
CFTRP13569 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC28.13■■■□□ 2.09
CFTRP13569 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC28.13■■■□□ 2.09
CFTRP13569 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC28.13■■■□□ 2.09
CFTRP13569 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC28.13■■■□□ 2.09
CFTRP13569 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC28.13■■■□□ 2.09
CFTRP13569 LINC01115-203ENST00000606068 577 ntBASIC28.13■■■□□ 2.09
CFTRP13569 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
CFTRP13569 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC28.13■■■□□ 2.09
CFTRP13569 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
CFTRP13569 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC28.12■■■□□ 2.09
CFTRP13569 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC28.12■■■□□ 2.09
CFTRP13569 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
CFTRP13569 AC005229.1-201ENST00000392885 409 ntBASIC28.12■■■□□ 2.09
CFTRP13569 FO393414.2-201ENST00000405153 598 ntBASIC28.12■■■□□ 2.09
CFTRP13569 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC28.12■■■□□ 2.09
CFTRP13569 RN7SL399P-201ENST00000471648 279 ntBASIC28.12■■■□□ 2.09
CFTRP13569 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC28.12■■■□□ 2.09
CFTRP13569 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC28.12■■■□□ 2.09
CFTRP13569 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
CFTRP13569 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC28.12■■■□□ 2.09
CFTRP13569 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC28.12■■■□□ 2.09
CFTRP13569 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
CFTRP13569 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
CFTRP13569 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC28.11■■■□□ 2.09
CFTRP13569 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC28.11■■■□□ 2.09
CFTRP13569 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC28.11■■■□□ 2.09
CFTRP13569 MIR1247-201ENST00000408206 136 ntBASIC28.11■■■□□ 2.09
CFTRP13569 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC28.11■■■□□ 2.09
CFTRP13569 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC28.11■■■□□ 2.09
CFTRP13569 RPL7P3-201ENST00000441388 714 ntBASIC28.11■■■□□ 2.09
CFTRP13569 AC104596.2-201ENST00000512793 793 ntBASIC28.11■■■□□ 2.09
CFTRP13569 AC020765.3-201ENST00000613051 740 ntBASIC28.11■■■□□ 2.09
CFTRP13569 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC28.11■■■□□ 2.09
CFTRP13569 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC28.11■■■□□ 2.09
CFTRP13569 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC28.11■■■□□ 2.09
CFTRP13569 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC28.11■■■□□ 2.09
CFTRP13569 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC28.11■■■□□ 2.09
CFTRP13569 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC28.11■■■□□ 2.09
CFTRP13569 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
CFTRP13569 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC28.11■■■□□ 2.09
CFTRP13569 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
CFTRP13569 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
CFTRP13569 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
CFTRP13569 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
CFTRP13569 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC28.11■■■□□ 2.09
CFTRP13569 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC28.11■■■□□ 2.09
CFTRP13569 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
CFTRP13569 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
CFTRP13569 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC28.1■■■□□ 2.09
CFTRP13569 AC124283.3-201ENST00000570869 594 ntBASIC28.1■■■□□ 2.09
CFTRP13569 AC103810.3-201ENST00000583567 96 ntBASIC28.1■■■□□ 2.09
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms