Protein–RNA interactions for Protein: P10826

RARB, Retinoic acid receptor beta, humanhuman

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARBP10826 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
RARBP10826 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RARBP10826 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RARBP10826 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RARBP10826 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RARBP10826 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
RARBP10826 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RARBP10826 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RARBP10826 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RARBP10826 AC009477.1-201ENST00000452936 217 ntBASIC18.69■□□□□ 0.58
RARBP10826 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RARBP10826 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RARBP10826 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC18.69■□□□□ 0.58
RARBP10826 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.69■□□□□ 0.58
RARBP10826 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC18.69■□□□□ 0.58
RARBP10826 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RARBP10826 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC18.69■□□□□ 0.58
RARBP10826 MIR6752-201ENST00000618442 71 ntBASIC18.69■□□□□ 0.58
RARBP10826 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RARBP10826 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RARBP10826 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RARBP10826 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.69■□□□□ 0.58
RARBP10826 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RARBP10826 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
RARBP10826 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RARBP10826 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RARBP10826 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC18.68■□□□□ 0.58
RARBP10826 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.68■□□□□ 0.58
RARBP10826 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RARBP10826 AC016396.2-201ENST00000562575 1417 ntBASIC18.68■□□□□ 0.58
RARBP10826 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RARBP10826 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RARBP10826 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
RARBP10826 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RARBP10826 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RARBP10826 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC18.68■□□□□ 0.58
RARBP10826 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RARBP10826 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC18.68■□□□□ 0.58
RARBP10826 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RARBP10826 STOM-203ENST00000538954 1257 ntTSL 5 BASIC18.68■□□□□ 0.58
RARBP10826 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC18.68■□□□□ 0.58
RARBP10826 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC18.68■□□□□ 0.58
RARBP10826 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC18.68■□□□□ 0.58
RARBP10826 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC18.68■□□□□ 0.58
RARBP10826 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RARBP10826 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RARBP10826 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RARBP10826 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RARBP10826 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC18.68■□□□□ 0.58
RARBP10826 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RARBP10826 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RARBP10826 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
RARBP10826 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RARBP10826 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.68■□□□□ 0.58
RARBP10826 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
RARBP10826 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RARBP10826 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
RARBP10826 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RARBP10826 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RARBP10826 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RARBP10826 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
RARBP10826 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
RARBP10826 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC18.67■□□□□ 0.58
RARBP10826 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RARBP10826 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RARBP10826 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.67■□□□□ 0.58
RARBP10826 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RARBP10826 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
RARBP10826 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
RARBP10826 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RARBP10826 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RARBP10826 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.67■□□□□ 0.58
RARBP10826 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC18.67■□□□□ 0.58
RARBP10826 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RARBP10826 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RARBP10826 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
RARBP10826 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RARBP10826 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.67■□□□□ 0.58
RARBP10826 CETN4P-206ENST00000642099 2168 ntBASIC18.67■□□□□ 0.58
RARBP10826 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.67■□□□□ 0.58
RARBP10826 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
RARBP10826 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RARBP10826 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RARBP10826 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RARBP10826 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
RARBP10826 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RARBP10826 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RARBP10826 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC18.67■□□□□ 0.58
RARBP10826 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
RARBP10826 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RARBP10826 MIR4492-201ENST00000581627 80 ntBASIC18.67■□□□□ 0.58
RARBP10826 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC18.67■□□□□ 0.58
RARBP10826 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC18.67■□□□□ 0.58
RARBP10826 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC18.67■□□□□ 0.58
RARBP10826 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
RARBP10826 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RARBP10826 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RARBP10826 AC087499.5-201ENST00000452760 1342 ntBASIC18.67■□□□□ 0.58
RARBP10826 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RARBP10826 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms