Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
RB1P06400 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC17.59■□□□□ 0.41
RB1P06400 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RB1P06400 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RB1P06400 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RB1P06400 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RB1P06400 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RB1P06400 MEP1AP4-201ENST00000423244 1087 ntBASIC17.59■□□□□ 0.41
RB1P06400 AC114501.2-201ENST00000439631 535 ntBASIC17.59■□□□□ 0.41
RB1P06400 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RB1P06400 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC17.59■□□□□ 0.41
RB1P06400 SERBP1P3-201ENST00000459980 809 ntBASIC17.59■□□□□ 0.41
RB1P06400 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC17.59■□□□□ 0.41
RB1P06400 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC17.59■□□□□ 0.41
RB1P06400 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC17.59■□□□□ 0.41
RB1P06400 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
RB1P06400 KRT17P8-201ENST00000540749 863 ntBASIC17.59■□□□□ 0.41
RB1P06400 RAB43P1-201ENST00000561790 589 ntBASIC17.59■□□□□ 0.41
RB1P06400 AC008494.3-201ENST00000606615 944 ntBASIC17.59■□□□□ 0.41
RB1P06400 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC17.59■□□□□ 0.41
RB1P06400 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RB1P06400 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.59■□□□□ 0.41
RB1P06400 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RB1P06400 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RB1P06400 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RB1P06400 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RB1P06400 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.59■□□□□ 0.41
RB1P06400 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.59■□□□□ 0.41
RB1P06400 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC17.59■□□□□ 0.41
RB1P06400 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RB1P06400 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.58■□□□□ 0.41
RB1P06400 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
RB1P06400 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC17.58■□□□□ 0.41
RB1P06400 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
RB1P06400 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
RB1P06400 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
RB1P06400 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC17.58■□□□□ 0.41
RB1P06400 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RB1P06400 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RB1P06400 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
RB1P06400 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RB1P06400 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC17.58■□□□□ 0.41
RB1P06400 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RB1P06400 SLC7A15P-201ENST00000424028 1363 ntBASIC17.58■□□□□ 0.4
RB1P06400 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
RB1P06400 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RB1P06400 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
RB1P06400 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
RB1P06400 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RB1P06400 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC17.58■□□□□ 0.4
RB1P06400 MXI1-205ENST00000393134 889 ntTSL 2 BASIC17.58■□□□□ 0.4
RB1P06400 MIR1909-201ENST00000411312 80 ntBASIC17.58■□□□□ 0.4
RB1P06400 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC17.58■□□□□ 0.4
RB1P06400 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC17.58■□□□□ 0.4
RB1P06400 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
RB1P06400 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC17.58■□□□□ 0.4
RB1P06400 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC17.58■□□□□ 0.4
RB1P06400 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC17.58■□□□□ 0.4
RB1P06400 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC17.58■□□□□ 0.4
RB1P06400 RPS15-212ENST00000593052 629 ntTSL 2 BASIC17.58■□□□□ 0.4
RB1P06400 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.58■□□□□ 0.4
RB1P06400 Six3os1_5.1-201ENST00000611000 271 ntBASIC17.58■□□□□ 0.4
RB1P06400 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
RB1P06400 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RB1P06400 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
RB1P06400 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
RB1P06400 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RB1P06400 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RB1P06400 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
RB1P06400 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RB1P06400 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.57■□□□□ 0.4
RB1P06400 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RB1P06400 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RB1P06400 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
RB1P06400 HTR7P1-202ENST00000624664 4411 ntBASIC17.57■□□□□ 0.4
RB1P06400 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RB1P06400 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
RB1P06400 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
RB1P06400 TUBB8P12-201ENST00000308911 1335 ntBASIC17.57■□□□□ 0.4
RB1P06400 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RB1P06400 TUBB7P-202ENST00000428444 1305 ntBASIC17.57■□□□□ 0.4
RB1P06400 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC17.57■□□□□ 0.4
RB1P06400 TUBB8P7-204ENST00000567960 1332 ntBASIC17.57■□□□□ 0.4
RB1P06400 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.57■□□□□ 0.4
RB1P06400 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RB1P06400 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RB1P06400 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC17.57■□□□□ 0.4
RB1P06400 AC112492.5-201ENST00000421897 457 ntBASIC17.57■□□□□ 0.4
RB1P06400 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
RB1P06400 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RB1P06400 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC17.57■□□□□ 0.4
RB1P06400 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC17.57■□□□□ 0.4
RB1P06400 AC055876.2-201ENST00000531834 546 ntBASIC17.57■□□□□ 0.4
RB1P06400 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC17.57■□□□□ 0.4
RB1P06400 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC17.57■□□□□ 0.4
RB1P06400 AL512361.1-201ENST00000554200 418 ntBASIC17.57■□□□□ 0.4
RB1P06400 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC17.57■□□□□ 0.4
RB1P06400 APOC4-201ENST00000591600 348 ntTSL 3 BASIC17.57■□□□□ 0.4
RB1P06400 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RB1P06400 TEX48-202ENST00000612244 662 ntTSL 3 BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms