Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HLA-DQB2P05538 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
HLA-DQB2P05538 BCAR1-209ENST00000546196 1340 ntBASIC16.98■□□□□ 0.31
HLA-DQB2P05538 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
HLA-DQB2P05538 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HLA-DQB2P05538 AC025580.3-201ENST00000617932 1424 ntBASIC16.98■□□□□ 0.31
HLA-DQB2P05538 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
HLA-DQB2P05538 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
HLA-DQB2P05538 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HLA-DQB2P05538 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.98■□□□□ 0.31
HLA-DQB2P05538 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.98■□□□□ 0.31
HLA-DQB2P05538 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
HLA-DQB2P05538 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC16.98■□□□□ 0.31
HLA-DQB2P05538 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
HLA-DQB2P05538 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
HLA-DQB2P05538 RNU1-129P-201ENST00000384064 167 ntBASIC16.98■□□□□ 0.31
HLA-DQB2P05538 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
HLA-DQB2P05538 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC16.98■□□□□ 0.31
HLA-DQB2P05538 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16.98■□□□□ 0.31
HLA-DQB2P05538 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
HLA-DQB2P05538 KRT18P3-201ENST00000451602 1288 ntBASIC16.98■□□□□ 0.31
HLA-DQB2P05538 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
HLA-DQB2P05538 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
HLA-DQB2P05538 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC16.98■□□□□ 0.31
HLA-DQB2P05538 KRT19P2-202ENST00000557173 1012 ntBASIC16.98■□□□□ 0.31
HLA-DQB2P05538 U1.21-201ENST00000580816 167 ntBASIC16.98■□□□□ 0.31
HLA-DQB2P05538 AC007064.4-201ENST00000637740 555 ntBASIC16.98■□□□□ 0.31
HLA-DQB2P05538 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HLA-DQB2P05538 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.98■□□□□ 0.31
HLA-DQB2P05538 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
HLA-DQB2P05538 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
HLA-DQB2P05538 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
HLA-DQB2P05538 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
HLA-DQB2P05538 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
HLA-DQB2P05538 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HLA-DQB2P05538 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HLA-DQB2P05538 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
HLA-DQB2P05538 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.98■□□□□ 0.31
HLA-DQB2P05538 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HLA-DQB2P05538 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
HLA-DQB2P05538 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
HLA-DQB2P05538 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.98■□□□□ 0.31
HLA-DQB2P05538 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
HLA-DQB2P05538 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.97■□□□□ 0.31
HLA-DQB2P05538 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
HLA-DQB2P05538 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HLA-DQB2P05538 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HLA-DQB2P05538 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.97■□□□□ 0.31
HLA-DQB2P05538 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HLA-DQB2P05538 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC16.97■□□□□ 0.31
HLA-DQB2P05538 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HLA-DQB2P05538 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HLA-DQB2P05538 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
HLA-DQB2P05538 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
HLA-DQB2P05538 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HLA-DQB2P05538 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
HLA-DQB2P05538 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HLA-DQB2P05538 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HLA-DQB2P05538 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HLA-DQB2P05538 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
HLA-DQB2P05538 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HLA-DQB2P05538 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
HLA-DQB2P05538 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC16.97■□□□□ 0.31
HLA-DQB2P05538 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
HLA-DQB2P05538 FALEC-201ENST00000416894 566 ntTSL 3 BASIC16.97■□□□□ 0.31
HLA-DQB2P05538 AL591424.1-201ENST00000442569 1213 ntBASIC16.97■□□□□ 0.31
HLA-DQB2P05538 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC16.97■□□□□ 0.31
HLA-DQB2P05538 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC16.97■□□□□ 0.31
HLA-DQB2P05538 RNA5SP416-201ENST00000516838 111 ntBASIC16.97■□□□□ 0.31
HLA-DQB2P05538 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC16.97■□□□□ 0.31
HLA-DQB2P05538 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC16.97■□□□□ 0.31
HLA-DQB2P05538 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC16.97■□□□□ 0.31
HLA-DQB2P05538 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
HLA-DQB2P05538 AL031055.1-201ENST00000606362 631 ntBASIC16.97■□□□□ 0.31
HLA-DQB2P05538 FAM197Y3-203ENST00000618346 717 ntBASIC16.97■□□□□ 0.31
HLA-DQB2P05538 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
HLA-DQB2P05538 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HLA-DQB2P05538 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.97■□□□□ 0.31
HLA-DQB2P05538 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC16.97■□□□□ 0.31
HLA-DQB2P05538 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
HLA-DQB2P05538 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HLA-DQB2P05538 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HLA-DQB2P05538 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HLA-DQB2P05538 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
HLA-DQB2P05538 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HLA-DQB2P05538 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC16.97■□□□□ 0.31
HLA-DQB2P05538 GGT3P-204ENST00000453783 1664 ntBASIC16.97■□□□□ 0.31
HLA-DQB2P05538 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HLA-DQB2P05538 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
HLA-DQB2P05538 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HLA-DQB2P05538 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HLA-DQB2P05538 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HLA-DQB2P05538 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HLA-DQB2P05538 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HLA-DQB2P05538 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HLA-DQB2P05538 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.96■□□□□ 0.31
HLA-DQB2P05538 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HLA-DQB2P05538 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HLA-DQB2P05538 AC005052.1-201ENST00000625181 2492 ntBASIC16.96■□□□□ 0.31
HLA-DQB2P05538 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms