Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
APOBP04114 NME9-203ENST00000383180 2133 ntTSL 2 BASIC10.25□□□□□ -0.77
APOBP04114 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
APOBP04114 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC10.25□□□□□ -0.77
APOBP04114 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
APOBP04114 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
APOBP04114 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
APOBP04114 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
APOBP04114 SERBP1P3-201ENST00000459980 809 ntBASIC10.25□□□□□ -0.77
APOBP04114 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC10.25□□□□□ -0.77
APOBP04114 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
APOBP04114 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC10.25□□□□□ -0.77
APOBP04114 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC10.25□□□□□ -0.77
APOBP04114 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC10.25□□□□□ -0.77
APOBP04114 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
APOBP04114 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC10.25□□□□□ -0.77
APOBP04114 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC10.25□□□□□ -0.77
APOBP04114 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
APOBP04114 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC10.25□□□□□ -0.77
APOBP04114 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC10.25□□□□□ -0.77
APOBP04114 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC10.25□□□□□ -0.77
APOBP04114 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
APOBP04114 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
APOBP04114 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
APOBP04114 RPS2P36-201ENST00000456516 831 ntBASIC10.25□□□□□ -0.77
APOBP04114 KRT8P13-201ENST00000463294 1010 ntBASIC10.25□□□□□ -0.77
APOBP04114 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC10.25□□□□□ -0.77
APOBP04114 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC10.25□□□□□ -0.77
APOBP04114 BICD1-207ENST00000551848 1962 ntBASIC10.25□□□□□ -0.77
APOBP04114 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC10.25□□□□□ -0.77
APOBP04114 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
APOBP04114 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC10.25□□□□□ -0.77
APOBP04114 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC10.25□□□□□ -0.77
APOBP04114 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC10.25□□□□□ -0.77
APOBP04114 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
APOBP04114 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC10.25□□□□□ -0.77
APOBP04114 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC10.25□□□□□ -0.77
APOBP04114 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC10.25□□□□□ -0.77
APOBP04114 TPO-206ENST00000382269 1155 ntTSL 5 BASIC10.25□□□□□ -0.77
APOBP04114 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC10.25□□□□□ -0.77
APOBP04114 AC006033.1-201ENST00000440505 426 ntBASIC10.25□□□□□ -0.77
APOBP04114 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC10.25□□□□□ -0.77
APOBP04114 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC10.25□□□□□ -0.77
APOBP04114 TIMM17BP1-201ENST00000545713 516 ntBASIC10.25□□□□□ -0.77
APOBP04114 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC10.25□□□□□ -0.77
APOBP04114 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC10.25□□□□□ -0.77
APOBP04114 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC10.25□□□□□ -0.77
APOBP04114 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
APOBP04114 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
APOBP04114 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC10.25□□□□□ -0.77
APOBP04114 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
APOBP04114 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC10.24□□□□□ -0.77
APOBP04114 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
APOBP04114 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
APOBP04114 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
APOBP04114 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC10.24□□□□□ -0.77
APOBP04114 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC10.24□□□□□ -0.77
APOBP04114 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC10.24□□□□□ -0.77
APOBP04114 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC10.24□□□□□ -0.77
APOBP04114 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
APOBP04114 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC10.24□□□□□ -0.77
APOBP04114 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
APOBP04114 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
APOBP04114 BRWD1P1-201ENST00000401091 371 ntBASIC10.24□□□□□ -0.77
APOBP04114 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC10.24□□□□□ -0.77
APOBP04114 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC10.24□□□□□ -0.77
APOBP04114 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC10.24□□□□□ -0.77
APOBP04114 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC10.24□□□□□ -0.77
APOBP04114 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC10.24□□□□□ -0.77
APOBP04114 CD276-201ENST00000318424 2738 ntTSL 5 BASIC10.24□□□□□ -0.77
APOBP04114 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
APOBP04114 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
APOBP04114 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
APOBP04114 GGCT-203ENST00000409144 836 ntTSL 2 BASIC10.24□□□□□ -0.77
APOBP04114 RPL28-203ENST00000428193 573 ntTSL 2 BASIC10.24□□□□□ -0.77
APOBP04114 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC10.24□□□□□ -0.77
APOBP04114 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
APOBP04114 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC10.24□□□□□ -0.77
APOBP04114 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
APOBP04114 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC10.24□□□□□ -0.77
APOBP04114 RPL28-207ENST00000558815 616 ntTSL 2 BASIC10.24□□□□□ -0.77
APOBP04114 DUX4L45-201ENST00000566406 1057 ntBASIC10.24□□□□□ -0.77
APOBP04114 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC10.24□□□□□ -0.77
APOBP04114 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
APOBP04114 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC10.24□□□□□ -0.77
APOBP04114 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC10.24□□□□□ -0.77
APOBP04114 KRT8P19-201ENST00000551916 1455 ntBASIC10.24□□□□□ -0.77
APOBP04114 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC10.24□□□□□ -0.77
APOBP04114 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC10.24□□□□□ -0.77
APOBP04114 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
APOBP04114 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC10.24□□□□□ -0.77
APOBP04114 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC10.24□□□□□ -0.77
APOBP04114 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
APOBP04114 CALR4P-201ENST00000431943 946 ntBASIC10.24□□□□□ -0.77
APOBP04114 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
APOBP04114 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
APOBP04114 AL359711.2-201ENST00000563105 872 ntBASIC10.24□□□□□ -0.77
APOBP04114 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC10.24□□□□□ -0.77
APOBP04114 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC10.24□□□□□ -0.77
APOBP04114 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC10.24□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms