Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
TRGV3P03979 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC13.22□□□□□ -0.29
TRGV3P03979 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRGV3P03979 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRGV3P03979 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
TRGV3P03979 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
TRGV3P03979 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRGV3P03979 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC13.22□□□□□ -0.29
TRGV3P03979 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
TRGV3P03979 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
TRGV3P03979 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRGV3P03979 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
TRGV3P03979 TOP3BP1-201ENST00000420768 1380 ntBASIC13.22□□□□□ -0.29
TRGV3P03979 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRGV3P03979 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
TRGV3P03979 AC005915.1-201ENST00000624912 2018 ntBASIC13.22□□□□□ -0.29
TRGV3P03979 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRGV3P03979 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
TRGV3P03979 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TRGV3P03979 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRGV3P03979 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRGV3P03979 TEX30-205ENST00000376029 959 ntTSL 2 BASIC13.22□□□□□ -0.29
TRGV3P03979 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
TRGV3P03979 AL022342.1-201ENST00000400363 863 ntBASIC13.22□□□□□ -0.29
TRGV3P03979 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TRGV3P03979 VN2R19P-201ENST00000442399 1052 ntBASIC13.22□□□□□ -0.29
TRGV3P03979 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC13.22□□□□□ -0.29
TRGV3P03979 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC13.22□□□□□ -0.29
TRGV3P03979 CIPC-205ENST00000555437 566 ntTSL 3 BASIC13.22□□□□□ -0.29
TRGV3P03979 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
TRGV3P03979 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRGV3P03979 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
TRGV3P03979 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC13.22□□□□□ -0.29
TRGV3P03979 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TRGV3P03979 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRGV3P03979 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRGV3P03979 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
TRGV3P03979 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRGV3P03979 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRGV3P03979 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC13.22□□□□□ -0.29
TRGV3P03979 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TRGV3P03979 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
TRGV3P03979 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRGV3P03979 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRGV3P03979 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC13.22□□□□□ -0.29
TRGV3P03979 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TRGV3P03979 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TRGV3P03979 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TRGV3P03979 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRGV3P03979 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC13.22□□□□□ -0.29
TRGV3P03979 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
TRGV3P03979 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC13.22□□□□□ -0.29
TRGV3P03979 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRGV3P03979 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TRGV3P03979 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC13.22□□□□□ -0.29
TRGV3P03979 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
TRGV3P03979 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRGV3P03979 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRGV3P03979 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRGV3P03979 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TRGV3P03979 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TRGV3P03979 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC13.21□□□□□ -0.29
TRGV3P03979 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC13.21□□□□□ -0.29
TRGV3P03979 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRGV3P03979 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
TRGV3P03979 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRGV3P03979 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRGV3P03979 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC13.21□□□□□ -0.29
TRGV3P03979 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRGV3P03979 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TRGV3P03979 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRGV3P03979 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TRGV3P03979 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRGV3P03979 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
TRGV3P03979 BEX3-201ENST00000361298 921 ntTSL 2 BASIC13.21□□□□□ -0.29
TRGV3P03979 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRGV3P03979 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC13.21□□□□□ -0.29
TRGV3P03979 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
TRGV3P03979 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRGV3P03979 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TRGV3P03979 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRGV3P03979 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC13.21□□□□□ -0.29
TRGV3P03979 SLC25A1P1-201ENST00000528351 927 ntBASIC13.21□□□□□ -0.29
TRGV3P03979 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRGV3P03979 RPL18-209ENST00000550645 463 ntTSL 5 BASIC13.21□□□□□ -0.29
TRGV3P03979 RPL18-214ENST00000552588 559 ntTSL 3 BASIC13.21□□□□□ -0.29
TRGV3P03979 AC034105.1-201ENST00000563488 319 ntBASIC13.21□□□□□ -0.29
TRGV3P03979 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC13.21□□□□□ -0.29
TRGV3P03979 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC13.21□□□□□ -0.29
TRGV3P03979 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC13.21□□□□□ -0.29
TRGV3P03979 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC13.21□□□□□ -0.29
TRGV3P03979 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
TRGV3P03979 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRGV3P03979 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRGV3P03979 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRGV3P03979 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRGV3P03979 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRGV3P03979 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRGV3P03979 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC13.21□□□□□ -0.29
TRGV3P03979 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms