Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
APOC1P02654 AC132008.2-207ENST00000454517 770 ntBASIC14.9□□□□□ -0.02
APOC1P02654 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
APOC1P02654 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC14.9□□□□□ -0.02
APOC1P02654 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
APOC1P02654 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC14.9□□□□□ -0.02
APOC1P02654 MIR3652-201ENST00000579335 131 ntBASIC14.9□□□□□ -0.02
APOC1P02654 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC14.9□□□□□ -0.02
APOC1P02654 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC14.9□□□□□ -0.02
APOC1P02654 AL022326.1-202ENST00000641533 845 ntBASIC14.9□□□□□ -0.02
APOC1P02654 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC14.9□□□□□ -0.02
APOC1P02654 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC14.9□□□□□ -0.02
APOC1P02654 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
APOC1P02654 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
APOC1P02654 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC14.9□□□□□ -0.02
APOC1P02654 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC14.9□□□□□ -0.02
APOC1P02654 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
APOC1P02654 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
APOC1P02654 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
APOC1P02654 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
APOC1P02654 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
APOC1P02654 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC14.9□□□□□ -0.02
APOC1P02654 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC14.9□□□□□ -0.02
APOC1P02654 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
APOC1P02654 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC14.89□□□□□ -0.03
APOC1P02654 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
APOC1P02654 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
APOC1P02654 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
APOC1P02654 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC14.89□□□□□ -0.03
APOC1P02654 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
APOC1P02654 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC14.89□□□□□ -0.03
APOC1P02654 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
APOC1P02654 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC14.89□□□□□ -0.03
APOC1P02654 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC14.89□□□□□ -0.03
APOC1P02654 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
APOC1P02654 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
APOC1P02654 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
APOC1P02654 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
APOC1P02654 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
APOC1P02654 MIR1224-201ENST00000408193 85 ntBASIC14.89□□□□□ -0.03
APOC1P02654 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
APOC1P02654 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC14.89□□□□□ -0.03
APOC1P02654 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
APOC1P02654 LINC01711-201ENST00000598340 967 ntBASIC14.89□□□□□ -0.03
APOC1P02654 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
APOC1P02654 IGHV3OR16-7-201ENST00000604106 360 ntBASIC14.89□□□□□ -0.03
APOC1P02654 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
APOC1P02654 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
APOC1P02654 AC023824.1-201ENST00000562945 2975 ntBASIC14.89□□□□□ -0.03
APOC1P02654 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
APOC1P02654 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
APOC1P02654 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
APOC1P02654 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
APOC1P02654 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
APOC1P02654 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
APOC1P02654 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
APOC1P02654 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
APOC1P02654 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
APOC1P02654 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
APOC1P02654 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
APOC1P02654 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC14.89□□□□□ -0.03
APOC1P02654 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
APOC1P02654 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.89□□□□□ -0.03
APOC1P02654 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.89□□□□□ -0.03
APOC1P02654 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
APOC1P02654 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
APOC1P02654 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
APOC1P02654 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
APOC1P02654 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
APOC1P02654 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
APOC1P02654 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
APOC1P02654 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
APOC1P02654 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
APOC1P02654 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
APOC1P02654 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
APOC1P02654 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
APOC1P02654 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
APOC1P02654 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
APOC1P02654 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
APOC1P02654 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
APOC1P02654 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC14.88□□□□□ -0.03
APOC1P02654 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
APOC1P02654 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC14.88□□□□□ -0.03
APOC1P02654 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC14.88□□□□□ -0.03
APOC1P02654 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
APOC1P02654 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
APOC1P02654 EMD-201ENST00000369835 966 ntTSL 3 BASIC14.88□□□□□ -0.03
APOC1P02654 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
APOC1P02654 AP002414.1-201ENST00000391405 1147 ntBASIC14.88□□□□□ -0.03
APOC1P02654 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC14.88□□□□□ -0.03
APOC1P02654 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC14.88□□□□□ -0.03
APOC1P02654 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC14.88□□□□□ -0.03
APOC1P02654 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
APOC1P02654 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
APOC1P02654 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC14.88□□□□□ -0.03
APOC1P02654 TPM1-218ENST00000559281 851 ntTSL 5 BASIC14.88□□□□□ -0.03
APOC1P02654 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC14.88□□□□□ -0.03
APOC1P02654 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC14.88□□□□□ -0.03
APOC1P02654 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC14.88□□□□□ -0.03
APOC1P02654 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms