Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.97■□□□□ 0.79
COL1A1P02452 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
COL1A1P02452 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
COL1A1P02452 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
COL1A1P02452 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC19.97■□□□□ 0.79
COL1A1P02452 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC19.97■□□□□ 0.79
COL1A1P02452 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC19.97■□□□□ 0.79
COL1A1P02452 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
COL1A1P02452 GRAMD4P3-201ENST00000621665 1669 ntBASIC19.97■□□□□ 0.79
COL1A1P02452 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
COL1A1P02452 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
COL1A1P02452 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COL1A1P02452 OR8S1-201ENST00000310194 1080 ntBASIC19.97■□□□□ 0.79
COL1A1P02452 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COL1A1P02452 RN7SL692P-201ENST00000464677 288 ntBASIC19.97■□□□□ 0.79
COL1A1P02452 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
COL1A1P02452 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC19.97■□□□□ 0.79
COL1A1P02452 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC19.97■□□□□ 0.79
COL1A1P02452 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC19.97■□□□□ 0.79
COL1A1P02452 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC19.97■□□□□ 0.79
COL1A1P02452 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
COL1A1P02452 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COL1A1P02452 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC19.97■□□□□ 0.79
COL1A1P02452 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
COL1A1P02452 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COL1A1P02452 AC022144.1-201ENST00000602255 1580 ntBASIC19.96■□□□□ 0.79
COL1A1P02452 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL1A1P02452 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL1A1P02452 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL1A1P02452 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL1A1P02452 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
COL1A1P02452 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC19.96■□□□□ 0.79
COL1A1P02452 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL1A1P02452 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
COL1A1P02452 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
COL1A1P02452 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
COL1A1P02452 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
COL1A1P02452 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC19.96■□□□□ 0.79
COL1A1P02452 VMO1-203ENST00000416307 712 ntTSL 2 BASIC19.96■□□□□ 0.79
COL1A1P02452 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
COL1A1P02452 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC19.96■□□□□ 0.79
COL1A1P02452 AP002490.2-201ENST00000524791 560 ntBASIC19.96■□□□□ 0.79
COL1A1P02452 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC19.96■□□□□ 0.79
COL1A1P02452 FHL2-212ENST00000607522 759 ntTSL 2 BASIC19.96■□□□□ 0.79
COL1A1P02452 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL1A1P02452 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC19.96■□□□□ 0.79
COL1A1P02452 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC19.96■□□□□ 0.79
COL1A1P02452 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
COL1A1P02452 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
COL1A1P02452 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC19.96■□□□□ 0.79
COL1A1P02452 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL1A1P02452 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
COL1A1P02452 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL1A1P02452 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL1A1P02452 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
COL1A1P02452 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC19.95■□□□□ 0.78
COL1A1P02452 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
COL1A1P02452 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC19.95■□□□□ 0.78
COL1A1P02452 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
COL1A1P02452 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
COL1A1P02452 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL1A1P02452 AL080243.2-201ENST00000418783 582 ntBASIC19.95■□□□□ 0.78
COL1A1P02452 AC007274.1-201ENST00000439805 662 ntBASIC19.95■□□□□ 0.78
COL1A1P02452 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL1A1P02452 NAA50-208ENST00000497255 789 ntTSL 5 BASIC19.95■□□□□ 0.78
COL1A1P02452 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
COL1A1P02452 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC19.95■□□□□ 0.78
COL1A1P02452 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
COL1A1P02452 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL1A1P02452 AL662799.1-202ENST00000614205 422 ntBASIC19.95■□□□□ 0.78
COL1A1P02452 SPTSSB-204ENST00000617024 1292 ntBASIC19.95■□□□□ 0.78
COL1A1P02452 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
COL1A1P02452 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL1A1P02452 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL1A1P02452 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC19.95■□□□□ 0.78
COL1A1P02452 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL1A1P02452 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL1A1P02452 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
COL1A1P02452 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL1A1P02452 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC19.94■□□□□ 0.78
COL1A1P02452 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
COL1A1P02452 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC19.94■□□□□ 0.78
COL1A1P02452 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
COL1A1P02452 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
COL1A1P02452 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
COL1A1P02452 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
COL1A1P02452 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
COL1A1P02452 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
COL1A1P02452 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
COL1A1P02452 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC19.94■□□□□ 0.78
COL1A1P02452 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC19.94■□□□□ 0.78
COL1A1P02452 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
COL1A1P02452 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC19.94■□□□□ 0.78
COL1A1P02452 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC19.94■□□□□ 0.78
COL1A1P02452 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC19.94■□□□□ 0.78
COL1A1P02452 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
COL1A1P02452 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC19.94■□□□□ 0.78
COL1A1P02452 AL133215.2-201ENST00000609242 977 ntBASIC19.94■□□□□ 0.78
COL1A1P02452 AC003101.2-201ENST00000612557 442 ntBASIC19.94■□□□□ 0.78
COL1A1P02452 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms