Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
ALDH1A1P00352 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
ALDH1A1P00352 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC18.9■□□□□ 0.62
ALDH1A1P00352 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ALDH1A1P00352 FRMD8P1-201ENST00000440433 1524 ntBASIC18.9■□□□□ 0.62
ALDH1A1P00352 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ALDH1A1P00352 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ALDH1A1P00352 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC18.9■□□□□ 0.62
ALDH1A1P00352 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ALDH1A1P00352 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ALDH1A1P00352 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ALDH1A1P00352 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ALDH1A1P00352 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ALDH1A1P00352 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC18.9■□□□□ 0.62
ALDH1A1P00352 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC18.9■□□□□ 0.62
ALDH1A1P00352 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ALDH1A1P00352 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC18.9■□□□□ 0.62
ALDH1A1P00352 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC18.9■□□□□ 0.62
ALDH1A1P00352 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC18.9■□□□□ 0.62
ALDH1A1P00352 RARRES2P5-201ENST00000564013 466 ntBASIC18.9■□□□□ 0.62
ALDH1A1P00352 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC18.9■□□□□ 0.62
ALDH1A1P00352 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
ALDH1A1P00352 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC18.9■□□□□ 0.62
ALDH1A1P00352 RETN-203ENST00000629642 400 ntTSL 5 BASIC18.9■□□□□ 0.62
ALDH1A1P00352 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
ALDH1A1P00352 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
ALDH1A1P00352 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ALDH1A1P00352 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC18.9■□□□□ 0.62
ALDH1A1P00352 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
ALDH1A1P00352 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ALDH1A1P00352 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ALDH1A1P00352 CLK3P2-201ENST00000427566 1453 ntBASIC18.9■□□□□ 0.62
ALDH1A1P00352 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ALDH1A1P00352 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.89■□□□□ 0.62
ALDH1A1P00352 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
ALDH1A1P00352 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
ALDH1A1P00352 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
ALDH1A1P00352 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
ALDH1A1P00352 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
ALDH1A1P00352 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ALDH1A1P00352 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ALDH1A1P00352 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ALDH1A1P00352 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ALDH1A1P00352 DPM2-202ENST00000373110 738 ntTSL 2 BASIC18.89■□□□□ 0.61
ALDH1A1P00352 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
ALDH1A1P00352 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ALDH1A1P00352 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC18.89■□□□□ 0.61
ALDH1A1P00352 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC18.89■□□□□ 0.61
ALDH1A1P00352 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ALDH1A1P00352 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC18.89■□□□□ 0.61
ALDH1A1P00352 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC18.89■□□□□ 0.61
ALDH1A1P00352 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC18.89■□□□□ 0.61
ALDH1A1P00352 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC18.89■□□□□ 0.61
ALDH1A1P00352 WNT11-204ENST00000621122 789 ntTSL 5 BASIC18.89■□□□□ 0.61
ALDH1A1P00352 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ALDH1A1P00352 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.89■□□□□ 0.61
ALDH1A1P00352 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.89■□□□□ 0.61
ALDH1A1P00352 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ALDH1A1P00352 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ALDH1A1P00352 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ALDH1A1P00352 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.88■□□□□ 0.61
ALDH1A1P00352 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ALDH1A1P00352 AC108860.2-201ENST00000562760 2183 ntBASIC18.88■□□□□ 0.61
ALDH1A1P00352 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ALDH1A1P00352 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ALDH1A1P00352 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.88■□□□□ 0.61
ALDH1A1P00352 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ALDH1A1P00352 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ALDH1A1P00352 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ALDH1A1P00352 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ALDH1A1P00352 FAM21FP-201ENST00000426241 1131 ntBASIC18.88■□□□□ 0.61
ALDH1A1P00352 TPI1-206ENST00000488464 791 ntTSL 5 BASIC18.88■□□□□ 0.61
ALDH1A1P00352 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC18.88■□□□□ 0.61
ALDH1A1P00352 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC18.88■□□□□ 0.61
ALDH1A1P00352 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC18.88■□□□□ 0.61
ALDH1A1P00352 SLC25A47P1-201ENST00000531577 414 ntBASIC18.88■□□□□ 0.61
ALDH1A1P00352 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC18.88■□□□□ 0.61
ALDH1A1P00352 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC18.88■□□□□ 0.61
ALDH1A1P00352 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC18.88■□□□□ 0.61
ALDH1A1P00352 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
ALDH1A1P00352 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ALDH1A1P00352 PDIA3P1-201ENST00000471856 1510 ntBASIC18.88■□□□□ 0.61
ALDH1A1P00352 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
ALDH1A1P00352 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC18.88■□□□□ 0.61
ALDH1A1P00352 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC18.88■□□□□ 0.61
ALDH1A1P00352 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ALDH1A1P00352 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC18.88■□□□□ 0.61
ALDH1A1P00352 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC18.88■□□□□ 0.61
ALDH1A1P00352 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC18.88■□□□□ 0.61
ALDH1A1P00352 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ALDH1A1P00352 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC18.88■□□□□ 0.61
ALDH1A1P00352 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ALDH1A1P00352 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ALDH1A1P00352 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ALDH1A1P00352 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
ALDH1A1P00352 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ALDH1A1P00352 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ALDH1A1P00352 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ALDH1A1P00352 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ALDH1A1P00352 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms