Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 BAD-202ENST00000394531 631 ntTSL 3 BASIC14.09□□□□□ -0.15
ABCA1O95477 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
ABCA1O95477 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC14.09□□□□□ -0.15
ABCA1O95477 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC14.09□□□□□ -0.15
ABCA1O95477 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC14.09□□□□□ -0.15
ABCA1O95477 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC14.09□□□□□ -0.15
ABCA1O95477 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC14.09□□□□□ -0.15
ABCA1O95477 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
ABCA1O95477 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC14.09□□□□□ -0.15
ABCA1O95477 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC14.09□□□□□ -0.15
ABCA1O95477 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC14.09□□□□□ -0.15
ABCA1O95477 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC14.09□□□□□ -0.15
ABCA1O95477 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
ABCA1O95477 BAD-207ENST00000544785 525 ntTSL 3 BASIC14.09□□□□□ -0.15
ABCA1O95477 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC14.09□□□□□ -0.15
ABCA1O95477 AL390754.1-201ENST00000619088 582 ntBASIC14.09□□□□□ -0.15
ABCA1O95477 AC025048.6-201ENST00000634326 1161 ntBASIC14.09□□□□□ -0.15
ABCA1O95477 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
ABCA1O95477 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ABCA1O95477 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC14.09□□□□□ -0.15
ABCA1O95477 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
ABCA1O95477 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
ABCA1O95477 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
ABCA1O95477 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
ABCA1O95477 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ABCA1O95477 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
ABCA1O95477 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
ABCA1O95477 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ABCA1O95477 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ABCA1O95477 FLJ13224-201ENST00000313737 1514 ntBASIC14.09□□□□□ -0.15
ABCA1O95477 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.15
ABCA1O95477 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
ABCA1O95477 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC14.08□□□□□ -0.15
ABCA1O95477 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
ABCA1O95477 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
ABCA1O95477 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC14.08□□□□□ -0.15
ABCA1O95477 MYCLP1-201ENST00000372451 1075 ntBASIC14.08□□□□□ -0.15
ABCA1O95477 AL671277.1-201ENST00000429656 993 ntBASIC14.08□□□□□ -0.15
ABCA1O95477 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
ABCA1O95477 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC14.08□□□□□ -0.15
ABCA1O95477 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
ABCA1O95477 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC14.08□□□□□ -0.15
ABCA1O95477 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC14.08□□□□□ -0.15
ABCA1O95477 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC14.08□□□□□ -0.15
ABCA1O95477 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC14.08□□□□□ -0.15
ABCA1O95477 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ABCA1O95477 LINC00896-202ENST00000609602 2128 ntBASIC14.08□□□□□ -0.16
ABCA1O95477 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
ABCA1O95477 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC14.08□□□□□ -0.16
ABCA1O95477 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
ABCA1O95477 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC14.08□□□□□ -0.16
ABCA1O95477 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
ABCA1O95477 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
ABCA1O95477 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
ABCA1O95477 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
ABCA1O95477 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ABCA1O95477 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ABCA1O95477 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC14.08□□□□□ -0.16
ABCA1O95477 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
ABCA1O95477 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
ABCA1O95477 AMT-250ENST00000637682 1823 ntTSL 5 BASIC14.08□□□□□ -0.16
ABCA1O95477 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ABCA1O95477 GOLGA6L11P-201ENST00000417252 1298 ntBASIC14.08□□□□□ -0.16
ABCA1O95477 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC14.08□□□□□ -0.16
ABCA1O95477 KLF2P3-201ENST00000451977 1087 ntBASIC14.08□□□□□ -0.16
ABCA1O95477 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC14.08□□□□□ -0.16
ABCA1O95477 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
ABCA1O95477 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
ABCA1O95477 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC14.08□□□□□ -0.16
ABCA1O95477 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC14.08□□□□□ -0.16
ABCA1O95477 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ABCA1O95477 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
ABCA1O95477 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
ABCA1O95477 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
ABCA1O95477 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ABCA1O95477 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ABCA1O95477 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC14.07□□□□□ -0.16
ABCA1O95477 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ABCA1O95477 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
ABCA1O95477 TDG-209ENST00000544861 1387 ntTSL 2 BASIC14.07□□□□□ -0.16
ABCA1O95477 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ABCA1O95477 F11R-206ENST00000621309 4770 ntTSL 5 BASIC14.07□□□□□ -0.16
ABCA1O95477 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
ABCA1O95477 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC14.07□□□□□ -0.16
ABCA1O95477 LINC01225-203ENST00000563550 1244 ntBASIC14.07□□□□□ -0.16
ABCA1O95477 AC010336.2-201ENST00000564226 506 ntBASIC14.07□□□□□ -0.16
ABCA1O95477 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC14.07□□□□□ -0.16
ABCA1O95477 AC027307.3-201ENST00000594262 1100 ntBASIC14.07□□□□□ -0.16
ABCA1O95477 CECR7-204ENST00000609932 568 ntTSL 2 BASIC14.07□□□□□ -0.16
ABCA1O95477 SRP9-204ENST00000619790 377 ntTSL 2 BASIC14.07□□□□□ -0.16
ABCA1O95477 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
ABCA1O95477 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
ABCA1O95477 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ABCA1O95477 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
ABCA1O95477 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC14.07□□□□□ -0.16
ABCA1O95477 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC14.07□□□□□ -0.16
ABCA1O95477 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC14.07□□□□□ -0.16
ABCA1O95477 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC14.07□□□□□ -0.16
ABCA1O95477 AL135999.2-201ENST00000622438 1686 ntBASIC14.07□□□□□ -0.16
ABCA1O95477 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms