Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC19.49■□□□□ 0.71
CDKL5O76039 AC012569.1-201ENST00000591191 1524 ntBASIC19.49■□□□□ 0.71
CDKL5O76039 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDKL5O76039 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CDKL5O76039 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDKL5O76039 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
CDKL5O76039 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDKL5O76039 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDKL5O76039 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
CDKL5O76039 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDKL5O76039 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC19.49■□□□□ 0.71
CDKL5O76039 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDKL5O76039 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC19.48■□□□□ 0.71
CDKL5O76039 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDKL5O76039 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
CDKL5O76039 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDKL5O76039 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
CDKL5O76039 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CDKL5O76039 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CDKL5O76039 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDKL5O76039 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDKL5O76039 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC19.48■□□□□ 0.71
CDKL5O76039 CRYGEP-201ENST00000412192 528 ntBASIC19.48■□□□□ 0.71
CDKL5O76039 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CDKL5O76039 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC19.48■□□□□ 0.71
CDKL5O76039 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC19.48■□□□□ 0.71
CDKL5O76039 CD63-204ENST00000546939 779 ntTSL 3 BASIC19.48■□□□□ 0.71
CDKL5O76039 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC19.48■□□□□ 0.71
CDKL5O76039 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC19.48■□□□□ 0.71
CDKL5O76039 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CDKL5O76039 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
CDKL5O76039 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
CDKL5O76039 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC19.48■□□□□ 0.71
CDKL5O76039 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CDKL5O76039 AL512652.2-201ENST00000625156 1716 ntBASIC19.48■□□□□ 0.71
CDKL5O76039 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC19.48■□□□□ 0.71
CDKL5O76039 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC19.48■□□□□ 0.71
CDKL5O76039 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CDKL5O76039 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDKL5O76039 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CDKL5O76039 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
CDKL5O76039 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CDKL5O76039 AL671710.1-201ENST00000610245 2349 ntBASIC19.47■□□□□ 0.71
CDKL5O76039 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC19.47■□□□□ 0.71
CDKL5O76039 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDKL5O76039 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC19.47■□□□□ 0.71
CDKL5O76039 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CDKL5O76039 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC19.47■□□□□ 0.71
CDKL5O76039 CD63-210ENST00000550776 870 ntTSL 5 BASIC19.47■□□□□ 0.71
CDKL5O76039 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC19.47■□□□□ 0.71
CDKL5O76039 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC19.47■□□□□ 0.71
CDKL5O76039 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDKL5O76039 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC19.47■□□□□ 0.71
CDKL5O76039 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDKL5O76039 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
CDKL5O76039 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDKL5O76039 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDKL5O76039 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDKL5O76039 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CDKL5O76039 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CDKL5O76039 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDKL5O76039 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
CDKL5O76039 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC19.46■□□□□ 0.71
CDKL5O76039 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC19.46■□□□□ 0.71
CDKL5O76039 GGT3P-204ENST00000453783 1664 ntBASIC19.46■□□□□ 0.71
CDKL5O76039 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDKL5O76039 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDKL5O76039 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC19.46■□□□□ 0.71
CDKL5O76039 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
CDKL5O76039 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
CDKL5O76039 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDKL5O76039 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDKL5O76039 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDKL5O76039 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
CDKL5O76039 AC079776.4-201ENST00000511039 504 ntBASIC19.46■□□□□ 0.71
CDKL5O76039 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
CDKL5O76039 MIR4515-201ENST00000584082 81 ntBASIC19.46■□□□□ 0.71
CDKL5O76039 Z83851.2-201ENST00000609564 659 ntBASIC19.46■□□□□ 0.71
CDKL5O76039 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC19.46■□□□□ 0.71
CDKL5O76039 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDKL5O76039 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDKL5O76039 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDKL5O76039 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC19.46■□□□□ 0.71
CDKL5O76039 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CDKL5O76039 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CDKL5O76039 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDKL5O76039 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC19.46■□□□□ 0.71
CDKL5O76039 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDKL5O76039 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDKL5O76039 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDKL5O76039 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC19.45■□□□□ 0.7
CDKL5O76039 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC19.45■□□□□ 0.7
CDKL5O76039 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CDKL5O76039 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDKL5O76039 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDKL5O76039 F11R-206ENST00000621309 4770 ntTSL 5 BASIC19.45■□□□□ 0.7
CDKL5O76039 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDKL5O76039 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDKL5O76039 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
CDKL5O76039 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms