Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRCH4O75427 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC17.43■□□□□ 0.38
LRCH4O75427 CYP2T1P-202ENST00000641596 2535 ntBASIC17.43■□□□□ 0.38
LRCH4O75427 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRCH4O75427 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LRCH4O75427 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
LRCH4O75427 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRCH4O75427 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRCH4O75427 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRCH4O75427 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC17.43■□□□□ 0.38
LRCH4O75427 CDK2AP2P3-201ENST00000422476 372 ntBASIC17.43■□□□□ 0.38
LRCH4O75427 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC17.43■□□□□ 0.38
LRCH4O75427 VN2R19P-201ENST00000442399 1052 ntBASIC17.43■□□□□ 0.38
LRCH4O75427 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.43■□□□□ 0.38
LRCH4O75427 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
LRCH4O75427 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LRCH4O75427 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC17.43■□□□□ 0.38
LRCH4O75427 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC17.43■□□□□ 0.38
LRCH4O75427 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC17.43■□□□□ 0.38
LRCH4O75427 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LRCH4O75427 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LRCH4O75427 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LRCH4O75427 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRCH4O75427 SLC9A3P2-201ENST00000447821 2021 ntBASIC17.43■□□□□ 0.38
LRCH4O75427 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.43■□□□□ 0.38
LRCH4O75427 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRCH4O75427 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRCH4O75427 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRCH4O75427 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC17.43■□□□□ 0.38
LRCH4O75427 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LRCH4O75427 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC17.43■□□□□ 0.38
LRCH4O75427 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRCH4O75427 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC17.43■□□□□ 0.38
LRCH4O75427 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LRCH4O75427 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRCH4O75427 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRCH4O75427 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC17.43■□□□□ 0.38
LRCH4O75427 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LRCH4O75427 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRCH4O75427 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
LRCH4O75427 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRCH4O75427 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
LRCH4O75427 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRCH4O75427 AC012569.1-201ENST00000591191 1524 ntBASIC17.42■□□□□ 0.38
LRCH4O75427 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRCH4O75427 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
LRCH4O75427 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRCH4O75427 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
LRCH4O75427 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRCH4O75427 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRCH4O75427 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LRCH4O75427 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LRCH4O75427 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRCH4O75427 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRCH4O75427 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC17.42■□□□□ 0.38
LRCH4O75427 TCAP-202ENST00000578283 583 ntTSL 5 BASIC17.42■□□□□ 0.38
LRCH4O75427 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC17.42■□□□□ 0.38
LRCH4O75427 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC17.42■□□□□ 0.38
LRCH4O75427 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRCH4O75427 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRCH4O75427 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRCH4O75427 HARS-203ENST00000431330 1774 ntTSL 2 BASIC17.42■□□□□ 0.38
LRCH4O75427 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRCH4O75427 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC17.42■□□□□ 0.38
LRCH4O75427 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LRCH4O75427 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRCH4O75427 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
LRCH4O75427 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRCH4O75427 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC17.42■□□□□ 0.38
LRCH4O75427 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LRCH4O75427 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LRCH4O75427 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRCH4O75427 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRCH4O75427 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC17.42■□□□□ 0.38
LRCH4O75427 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
LRCH4O75427 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC17.41■□□□□ 0.38
LRCH4O75427 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC17.41■□□□□ 0.38
LRCH4O75427 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRCH4O75427 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRCH4O75427 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRCH4O75427 GPAA1P2-202ENST00000606848 1787 ntBASIC17.41■□□□□ 0.38
LRCH4O75427 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC17.41■□□□□ 0.38
LRCH4O75427 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
LRCH4O75427 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRCH4O75427 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC17.41■□□□□ 0.38
LRCH4O75427 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LRCH4O75427 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
LRCH4O75427 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC17.41■□□□□ 0.38
LRCH4O75427 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC17.41■□□□□ 0.38
LRCH4O75427 METTL26-205ENST00000397666 726 ntTSL 2 BASIC17.41■□□□□ 0.38
LRCH4O75427 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC17.41■□□□□ 0.38
LRCH4O75427 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LRCH4O75427 HCG4B-203ENST00000450128 991 ntBASIC17.41■□□□□ 0.38
LRCH4O75427 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC17.41■□□□□ 0.38
LRCH4O75427 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LRCH4O75427 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17.41■□□□□ 0.38
LRCH4O75427 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRCH4O75427 MIR4515-201ENST00000584082 81 ntBASIC17.41■□□□□ 0.38
LRCH4O75427 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRCH4O75427 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms