Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TSPAN3O60637 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.35
TSPAN3O60637 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TSPAN3O60637 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TSPAN3O60637 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TSPAN3O60637 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TSPAN3O60637 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TSPAN3O60637 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17.27■□□□□ 0.35
TSPAN3O60637 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TSPAN3O60637 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TSPAN3O60637 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TSPAN3O60637 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
TSPAN3O60637 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.35
TSPAN3O60637 AL671710.1-201ENST00000610245 2349 ntBASIC17.26■□□□□ 0.35
TSPAN3O60637 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.26■□□□□ 0.35
TSPAN3O60637 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC17.26■□□□□ 0.35
TSPAN3O60637 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
TSPAN3O60637 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TSPAN3O60637 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TSPAN3O60637 AC092474.2-201ENST00000424288 719 ntBASIC17.26■□□□□ 0.35
TSPAN3O60637 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TSPAN3O60637 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC17.26■□□□□ 0.35
TSPAN3O60637 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TSPAN3O60637 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
TSPAN3O60637 GATB-205ENST00000508611 605 ntTSL 2 BASIC17.26■□□□□ 0.35
TSPAN3O60637 AP000344.2-201ENST00000512987 629 ntBASIC17.26■□□□□ 0.35
TSPAN3O60637 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
TSPAN3O60637 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC17.26■□□□□ 0.35
TSPAN3O60637 AC004835.2-201ENST00000603762 682 ntBASIC17.26■□□□□ 0.35
TSPAN3O60637 AL161645.1-201ENST00000622716 1255 ntBASIC17.26■□□□□ 0.35
TSPAN3O60637 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
TSPAN3O60637 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TSPAN3O60637 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC17.26■□□□□ 0.35
TSPAN3O60637 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TSPAN3O60637 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
TSPAN3O60637 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
TSPAN3O60637 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
TSPAN3O60637 CROCCP1-201ENST00000426910 5675 ntBASIC17.26■□□□□ 0.35
TSPAN3O60637 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TSPAN3O60637 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TSPAN3O60637 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
TSPAN3O60637 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.25■□□□□ 0.35
TSPAN3O60637 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TSPAN3O60637 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TSPAN3O60637 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
TSPAN3O60637 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TSPAN3O60637 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC17.25■□□□□ 0.35
TSPAN3O60637 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TSPAN3O60637 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.25■□□□□ 0.35
TSPAN3O60637 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
TSPAN3O60637 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.25■□□□□ 0.35
TSPAN3O60637 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TSPAN3O60637 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TSPAN3O60637 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TSPAN3O60637 SLC9A3P2-201ENST00000447821 2021 ntBASIC17.25■□□□□ 0.35
TSPAN3O60637 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
TSPAN3O60637 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.25■□□□□ 0.35
TSPAN3O60637 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC17.25■□□□□ 0.35
TSPAN3O60637 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TSPAN3O60637 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TSPAN3O60637 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TSPAN3O60637 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC17.25■□□□□ 0.35
TSPAN3O60637 FAM86C2P-203ENST00000528684 1004 ntBASIC17.25■□□□□ 0.35
TSPAN3O60637 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
TSPAN3O60637 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TSPAN3O60637 AL135744.1-201ENST00000565098 629 ntBASIC17.25■□□□□ 0.35
TSPAN3O60637 RARRES2P8-201ENST00000566335 367 ntBASIC17.25■□□□□ 0.35
TSPAN3O60637 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC17.25■□□□□ 0.35
TSPAN3O60637 METTL23-205ENST00000588302 925 ntTSL 5 BASIC17.25■□□□□ 0.35
TSPAN3O60637 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TSPAN3O60637 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TSPAN3O60637 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TSPAN3O60637 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TSPAN3O60637 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
TSPAN3O60637 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TSPAN3O60637 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TSPAN3O60637 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
TSPAN3O60637 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
TSPAN3O60637 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.25■□□□□ 0.35
TSPAN3O60637 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
TSPAN3O60637 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TSPAN3O60637 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
TSPAN3O60637 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TSPAN3O60637 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TSPAN3O60637 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.25■□□□□ 0.35
TSPAN3O60637 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
TSPAN3O60637 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TSPAN3O60637 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TSPAN3O60637 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
TSPAN3O60637 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC17.24■□□□□ 0.35
TSPAN3O60637 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TSPAN3O60637 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TSPAN3O60637 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
TSPAN3O60637 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
TSPAN3O60637 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
TSPAN3O60637 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TSPAN3O60637 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TSPAN3O60637 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TSPAN3O60637 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TSPAN3O60637 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms