Protein–RNA interactions for Protein: O60479

DLX3, Homeobox protein DLX-3, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DLX3O60479 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
DLX3O60479 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
DLX3O60479 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.46■□□□□ 0.23
DLX3O60479 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.46■□□□□ 0.23
DLX3O60479 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC16.46■□□□□ 0.23
DLX3O60479 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
DLX3O60479 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.46■□□□□ 0.23
DLX3O60479 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
DLX3O60479 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.46■□□□□ 0.23
DLX3O60479 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
DLX3O60479 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.46■□□□□ 0.23
DLX3O60479 GGT4P-201ENST00000623672 1708 ntBASIC16.46■□□□□ 0.23
DLX3O60479 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
DLX3O60479 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
DLX3O60479 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC16.46■□□□□ 0.23
DLX3O60479 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC16.46■□□□□ 0.23
DLX3O60479 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
DLX3O60479 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
DLX3O60479 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
DLX3O60479 RBM17P3-201ENST00000417687 1192 ntBASIC16.46■□□□□ 0.23
DLX3O60479 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
DLX3O60479 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16.46■□□□□ 0.23
DLX3O60479 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC16.46■□□□□ 0.23
DLX3O60479 FOSL1P1-201ENST00000511041 816 ntBASIC16.46■□□□□ 0.23
DLX3O60479 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC16.46■□□□□ 0.23
DLX3O60479 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC16.46■□□□□ 0.23
DLX3O60479 REXO1L3P-201ENST00000622202 1288 ntBASIC16.46■□□□□ 0.23
DLX3O60479 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.46■□□□□ 0.23
DLX3O60479 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
DLX3O60479 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
DLX3O60479 AC002310.6-201ENST00000624451 1377 ntBASIC16.46■□□□□ 0.23
DLX3O60479 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
DLX3O60479 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
DLX3O60479 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.46■□□□□ 0.23
DLX3O60479 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
DLX3O60479 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
DLX3O60479 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
DLX3O60479 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
DLX3O60479 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
DLX3O60479 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.46■□□□□ 0.23
DLX3O60479 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
DLX3O60479 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
DLX3O60479 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
DLX3O60479 AC105917.1-201ENST00000506637 2539 ntBASIC16.46■□□□□ 0.22
DLX3O60479 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
DLX3O60479 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.46■□□□□ 0.22
DLX3O60479 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
DLX3O60479 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
DLX3O60479 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
DLX3O60479 KRT8P39-201ENST00000396270 1433 ntBASIC16.45■□□□□ 0.22
DLX3O60479 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
DLX3O60479 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC16.45■□□□□ 0.22
DLX3O60479 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
DLX3O60479 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
DLX3O60479 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
DLX3O60479 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
DLX3O60479 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
DLX3O60479 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.45■□□□□ 0.22
DLX3O60479 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
DLX3O60479 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
DLX3O60479 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
DLX3O60479 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
DLX3O60479 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
DLX3O60479 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.45■□□□□ 0.22
DLX3O60479 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
DLX3O60479 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC16.45■□□□□ 0.22
DLX3O60479 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC16.45■□□□□ 0.22
DLX3O60479 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC16.45■□□□□ 0.22
DLX3O60479 MTDHP3-201ENST00000594186 672 ntBASIC16.45■□□□□ 0.22
DLX3O60479 AC091076.1-201ENST00000610741 619 ntBASIC16.45■□□□□ 0.22
DLX3O60479 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC16.45■□□□□ 0.22
DLX3O60479 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC16.45■□□□□ 0.22
DLX3O60479 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
DLX3O60479 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
DLX3O60479 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
DLX3O60479 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
DLX3O60479 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
DLX3O60479 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
DLX3O60479 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
DLX3O60479 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
DLX3O60479 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
DLX3O60479 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
DLX3O60479 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
DLX3O60479 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
DLX3O60479 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC16.45■□□□□ 0.22
DLX3O60479 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
DLX3O60479 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
DLX3O60479 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.44■□□□□ 0.22
DLX3O60479 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
DLX3O60479 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
DLX3O60479 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.44■□□□□ 0.22
DLX3O60479 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
DLX3O60479 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.44■□□□□ 0.22
DLX3O60479 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.44■□□□□ 0.22
DLX3O60479 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.44■□□□□ 0.22
DLX3O60479 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
DLX3O60479 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
DLX3O60479 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
DLX3O60479 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.44■□□□□ 0.22
DLX3O60479 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms