Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC16.03■□□□□ 0.16
LCMT2O60294 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC16.03■□□□□ 0.16
LCMT2O60294 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC16.03■□□□□ 0.16
LCMT2O60294 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
LCMT2O60294 MED16-214ENST00000617672 554 ntTSL 5 BASIC16.03■□□□□ 0.16
LCMT2O60294 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LCMT2O60294 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LCMT2O60294 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
LCMT2O60294 AC006538.1-201ENST00000567905 1585 ntBASIC16.03■□□□□ 0.16
LCMT2O60294 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.03■□□□□ 0.16
LCMT2O60294 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
LCMT2O60294 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.03■□□□□ 0.16
LCMT2O60294 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
LCMT2O60294 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
LCMT2O60294 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.03■□□□□ 0.16
LCMT2O60294 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LCMT2O60294 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
LCMT2O60294 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LCMT2O60294 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
LCMT2O60294 SLC9A3P2-201ENST00000447821 2021 ntBASIC16.02■□□□□ 0.16
LCMT2O60294 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LCMT2O60294 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LCMT2O60294 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LCMT2O60294 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LCMT2O60294 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
LCMT2O60294 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.02■□□□□ 0.16
LCMT2O60294 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.02■□□□□ 0.16
LCMT2O60294 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
LCMT2O60294 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LCMT2O60294 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.16
LCMT2O60294 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.02■□□□□ 0.16
LCMT2O60294 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.02■□□□□ 0.16
LCMT2O60294 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LCMT2O60294 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
LCMT2O60294 SMN2-210ENST00000511812 867 ntTSL 2 BASIC16.02■□□□□ 0.16
LCMT2O60294 PDPK2P-202ENST00000562415 1191 ntBASIC16.02■□□□□ 0.16
LCMT2O60294 COX5A-206ENST00000568783 571 ntTSL 3 BASIC16.02■□□□□ 0.16
LCMT2O60294 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC16.02■□□□□ 0.16
LCMT2O60294 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC16.02■□□□□ 0.16
LCMT2O60294 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LCMT2O60294 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LCMT2O60294 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LCMT2O60294 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
LCMT2O60294 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
LCMT2O60294 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
LCMT2O60294 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
LCMT2O60294 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.02■□□□□ 0.15
LCMT2O60294 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.02■□□□□ 0.15
LCMT2O60294 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
LCMT2O60294 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.02■□□□□ 0.15
LCMT2O60294 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.15
LCMT2O60294 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
LCMT2O60294 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
LCMT2O60294 AC092919.2-201ENST00000623631 1645 ntBASIC16.01■□□□□ 0.15
LCMT2O60294 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LCMT2O60294 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
LCMT2O60294 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LCMT2O60294 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
LCMT2O60294 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LCMT2O60294 AC079328.2-201ENST00000561241 3354 ntBASIC16.01■□□□□ 0.15
LCMT2O60294 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
LCMT2O60294 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LCMT2O60294 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LCMT2O60294 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
LCMT2O60294 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LCMT2O60294 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC16.01■□□□□ 0.15
LCMT2O60294 CDK2AP2P3-201ENST00000422476 372 ntBASIC16.01■□□□□ 0.15
LCMT2O60294 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC16.01■□□□□ 0.15
LCMT2O60294 AC074386.1-202ENST00000463561 864 ntBASIC16.01■□□□□ 0.15
LCMT2O60294 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC16.01■□□□□ 0.15
LCMT2O60294 MTRF1LP2-201ENST00000506027 1122 ntBASIC16.01■□□□□ 0.15
LCMT2O60294 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC16.01■□□□□ 0.15
LCMT2O60294 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC16.01■□□□□ 0.15
LCMT2O60294 AC040169.1-201ENST00000565382 521 ntBASIC16.01■□□□□ 0.15
LCMT2O60294 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC16.01■□□□□ 0.15
LCMT2O60294 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.01■□□□□ 0.15
LCMT2O60294 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC16.01■□□□□ 0.15
LCMT2O60294 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.01■□□□□ 0.15
LCMT2O60294 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LCMT2O60294 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LCMT2O60294 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LCMT2O60294 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LCMT2O60294 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.01■□□□□ 0.15
LCMT2O60294 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
LCMT2O60294 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
LCMT2O60294 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LCMT2O60294 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
LCMT2O60294 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LCMT2O60294 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16■□□□□ 0.15
LCMT2O60294 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
LCMT2O60294 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16■□□□□ 0.15
LCMT2O60294 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
LCMT2O60294 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
LCMT2O60294 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16■□□□□ 0.15
LCMT2O60294 REM2-202ENST00000536884 1331 ntTSL 2 BASIC16■□□□□ 0.15
LCMT2O60294 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
LCMT2O60294 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
LCMT2O60294 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16■□□□□ 0.15
LCMT2O60294 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16■□□□□ 0.15
LCMT2O60294 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms