Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.06■□□□□ 0.32
RIPK2O43353 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC17.06■□□□□ 0.32
RIPK2O43353 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC17.06■□□□□ 0.32
RIPK2O43353 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC17.06■□□□□ 0.32
RIPK2O43353 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
RIPK2O43353 KRT8P26-201ENST00000534154 1276 ntBASIC17.06■□□□□ 0.32
RIPK2O43353 DET1-205ENST00000558413 583 ntTSL 4 BASIC17.06■□□□□ 0.32
RIPK2O43353 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
RIPK2O43353 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC17.06■□□□□ 0.32
RIPK2O43353 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC17.06■□□□□ 0.32
RIPK2O43353 TERC-201ENST00000602385 541 ntBASIC17.06■□□□□ 0.32
RIPK2O43353 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC17.06■□□□□ 0.32
RIPK2O43353 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.06■□□□□ 0.32
RIPK2O43353 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC17.06■□□□□ 0.32
RIPK2O43353 AC097493.4-201ENST00000641197 219 ntBASIC17.06■□□□□ 0.32
RIPK2O43353 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RIPK2O43353 AC068418.2-201ENST00000577309 3703 ntBASIC17.06■□□□□ 0.32
RIPK2O43353 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RIPK2O43353 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RIPK2O43353 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RIPK2O43353 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RIPK2O43353 AL031731.1-201ENST00000642131 2094 ntBASIC17.06■□□□□ 0.32
RIPK2O43353 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC17.06■□□□□ 0.32
RIPK2O43353 AL356309.3-201ENST00000624132 1934 ntBASIC17.06■□□□□ 0.32
RIPK2O43353 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
RIPK2O43353 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RIPK2O43353 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
RIPK2O43353 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RIPK2O43353 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC17.05■□□□□ 0.32
RIPK2O43353 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RIPK2O43353 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RIPK2O43353 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RIPK2O43353 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RIPK2O43353 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RIPK2O43353 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RIPK2O43353 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC17.05■□□□□ 0.32
RIPK2O43353 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RIPK2O43353 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC17.05■□□□□ 0.32
RIPK2O43353 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RIPK2O43353 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RIPK2O43353 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC17.05■□□□□ 0.32
RIPK2O43353 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RIPK2O43353 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RIPK2O43353 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC17.05■□□□□ 0.32
RIPK2O43353 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC17.05■□□□□ 0.32
RIPK2O43353 KRT18P57-201ENST00000443599 1254 ntBASIC17.05■□□□□ 0.32
RIPK2O43353 AL671277.2-201ENST00000458060 996 ntBASIC17.05■□□□□ 0.32
RIPK2O43353 VENTXP7-201ENST00000475503 772 ntBASIC17.05■□□□□ 0.32
RIPK2O43353 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17.05■□□□□ 0.32
RIPK2O43353 ABR-217ENST00000572441 563 ntTSL 4 BASIC17.05■□□□□ 0.32
RIPK2O43353 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC17.05■□□□□ 0.32
RIPK2O43353 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RIPK2O43353 NDUFV2-AS1-203ENST00000608008 779 ntBASIC17.05■□□□□ 0.32
RIPK2O43353 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC17.05■□□□□ 0.32
RIPK2O43353 AC133561.5-201ENST00000635547 218 ntBASIC17.05■□□□□ 0.32
RIPK2O43353 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC17.05■□□□□ 0.32
RIPK2O43353 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
RIPK2O43353 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RIPK2O43353 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RIPK2O43353 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC17.05■□□□□ 0.32
RIPK2O43353 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RIPK2O43353 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RIPK2O43353 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RIPK2O43353 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC17.05■□□□□ 0.32
RIPK2O43353 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RIPK2O43353 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RIPK2O43353 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RIPK2O43353 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC17.04■□□□□ 0.32
RIPK2O43353 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RIPK2O43353 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC17.04■□□□□ 0.32
RIPK2O43353 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RIPK2O43353 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RIPK2O43353 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
RIPK2O43353 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RIPK2O43353 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC17.04■□□□□ 0.32
RIPK2O43353 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC17.04■□□□□ 0.32
RIPK2O43353 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RIPK2O43353 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RIPK2O43353 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC17.04■□□□□ 0.32
RIPK2O43353 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
RIPK2O43353 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RIPK2O43353 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RIPK2O43353 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
RIPK2O43353 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC17.04■□□□□ 0.32
RIPK2O43353 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RIPK2O43353 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RIPK2O43353 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.04■□□□□ 0.32
RIPK2O43353 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC17.04■□□□□ 0.32
RIPK2O43353 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
RIPK2O43353 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
RIPK2O43353 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RIPK2O43353 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
RIPK2O43353 AP000867.4-201ENST00000641616 219 ntBASIC17.04■□□□□ 0.32
RIPK2O43353 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RIPK2O43353 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC17.04■□□□□ 0.32
RIPK2O43353 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
RIPK2O43353 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
RIPK2O43353 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
RIPK2O43353 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RIPK2O43353 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms