Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ATP2A1O14983 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC19.12■□□□□ 0.65
ATP2A1O14983 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC19.12■□□□□ 0.65
ATP2A1O14983 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ATP2A1O14983 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
ATP2A1O14983 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ATP2A1O14983 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
ATP2A1O14983 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
ATP2A1O14983 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ATP2A1O14983 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC19.12■□□□□ 0.65
ATP2A1O14983 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC19.12■□□□□ 0.65
ATP2A1O14983 CENPM-205ENST00000404067 905 ntTSL 3 BASIC19.12■□□□□ 0.65
ATP2A1O14983 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC19.12■□□□□ 0.65
ATP2A1O14983 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC19.12■□□□□ 0.65
ATP2A1O14983 AC097493.3-201ENST00000509725 367 ntBASIC19.12■□□□□ 0.65
ATP2A1O14983 AC069120.2-201ENST00000524091 540 ntBASIC19.12■□□□□ 0.65
ATP2A1O14983 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC19.12■□□□□ 0.65
ATP2A1O14983 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC19.12■□□□□ 0.65
ATP2A1O14983 NAA60-208ENST00000570819 833 ntTSL 2 BASIC19.12■□□□□ 0.65
ATP2A1O14983 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC19.12■□□□□ 0.65
ATP2A1O14983 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ATP2A1O14983 AC067852.2-201ENST00000590513 2313 ntBASIC19.12■□□□□ 0.65
ATP2A1O14983 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ATP2A1O14983 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ATP2A1O14983 AC092053.1-201ENST00000605787 1936 ntBASIC19.12■□□□□ 0.65
ATP2A1O14983 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ATP2A1O14983 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ATP2A1O14983 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ATP2A1O14983 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
ATP2A1O14983 FOXO1B-201ENST00000504678 1527 ntBASIC19.11■□□□□ 0.65
ATP2A1O14983 FST-202ENST00000396947 2538 ntTSL 5 BASIC19.11■□□□□ 0.65
ATP2A1O14983 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC19.11■□□□□ 0.65
ATP2A1O14983 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ATP2A1O14983 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ATP2A1O14983 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC19.11■□□□□ 0.65
ATP2A1O14983 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC19.11■□□□□ 0.65
ATP2A1O14983 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ATP2A1O14983 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ATP2A1O14983 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
ATP2A1O14983 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
ATP2A1O14983 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC19.11■□□□□ 0.65
ATP2A1O14983 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
ATP2A1O14983 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC19.11■□□□□ 0.65
ATP2A1O14983 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC19.11■□□□□ 0.65
ATP2A1O14983 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC19.11■□□□□ 0.65
ATP2A1O14983 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC19.11■□□□□ 0.65
ATP2A1O14983 RARRES2P9-201ENST00000565168 469 ntBASIC19.11■□□□□ 0.65
ATP2A1O14983 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC19.11■□□□□ 0.65
ATP2A1O14983 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ATP2A1O14983 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
ATP2A1O14983 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
ATP2A1O14983 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ATP2A1O14983 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
ATP2A1O14983 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ATP2A1O14983 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ATP2A1O14983 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ATP2A1O14983 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ATP2A1O14983 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ATP2A1O14983 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
ATP2A1O14983 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
ATP2A1O14983 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ATP2A1O14983 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ATP2A1O14983 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
ATP2A1O14983 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ATP2A1O14983 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC19.1■□□□□ 0.65
ATP2A1O14983 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ATP2A1O14983 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC19.1■□□□□ 0.65
ATP2A1O14983 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ATP2A1O14983 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ATP2A1O14983 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ATP2A1O14983 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC19.1■□□□□ 0.65
ATP2A1O14983 AC092580.3-201ENST00000430932 139 ntBASIC19.1■□□□□ 0.65
ATP2A1O14983 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC19.1■□□□□ 0.65
ATP2A1O14983 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ATP2A1O14983 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
ATP2A1O14983 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC19.1■□□□□ 0.65
ATP2A1O14983 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ATP2A1O14983 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC19.1■□□□□ 0.65
ATP2A1O14983 MIR4453-201ENST00000584019 89 ntBASIC19.1■□□□□ 0.65
ATP2A1O14983 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC19.1■□□□□ 0.65
ATP2A1O14983 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC19.1■□□□□ 0.65
ATP2A1O14983 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ATP2A1O14983 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC19.1■□□□□ 0.65
ATP2A1O14983 AC018529.1-201ENST00000613063 361 ntBASIC19.1■□□□□ 0.65
ATP2A1O14983 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ATP2A1O14983 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
ATP2A1O14983 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC19.1■□□□□ 0.65
ATP2A1O14983 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ATP2A1O14983 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC19.1■□□□□ 0.65
ATP2A1O14983 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
ATP2A1O14983 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.1■□□□□ 0.65
ATP2A1O14983 AP3S2-216ENST00000617003 1561 ntBASIC19.1■□□□□ 0.65
ATP2A1O14983 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC19.09■□□□□ 0.65
ATP2A1O14983 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC19.09■□□□□ 0.65
ATP2A1O14983 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ATP2A1O14983 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ATP2A1O14983 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ATP2A1O14983 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ATP2A1O14983 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ATP2A1O14983 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms