Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDC7O00311 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
CDC7O00311 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
CDC7O00311 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDC7O00311 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CDC7O00311 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDC7O00311 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.47■□□□□ 0.23
CDC7O00311 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CDC7O00311 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CDC7O00311 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CDC7O00311 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.47■□□□□ 0.23
CDC7O00311 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDC7O00311 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDC7O00311 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
CDC7O00311 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDC7O00311 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
CDC7O00311 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.46■□□□□ 0.23
CDC7O00311 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.46■□□□□ 0.23
CDC7O00311 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.46■□□□□ 0.23
CDC7O00311 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CDC7O00311 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC16.46■□□□□ 0.23
CDC7O00311 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.46■□□□□ 0.23
CDC7O00311 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDC7O00311 ME2P1-201ENST00000426028 1970 ntBASIC16.46■□□□□ 0.23
CDC7O00311 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
CDC7O00311 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.46■□□□□ 0.23
CDC7O00311 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDC7O00311 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC16.46■□□□□ 0.23
CDC7O00311 INIP-202ENST00000374236 874 ntTSL 2 BASIC16.46■□□□□ 0.23
CDC7O00311 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC16.46■□□□□ 0.23
CDC7O00311 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDC7O00311 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC16.46■□□□□ 0.23
CDC7O00311 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC16.46■□□□□ 0.23
CDC7O00311 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC16.46■□□□□ 0.23
CDC7O00311 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC16.46■□□□□ 0.23
CDC7O00311 AC091167.2-201ENST00000579581 588 ntBASIC16.46■□□□□ 0.23
CDC7O00311 CYB561-216ENST00000582297 897 ntTSL 3 BASIC16.46■□□□□ 0.23
CDC7O00311 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.46■□□□□ 0.23
CDC7O00311 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC16.46■□□□□ 0.23
CDC7O00311 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDC7O00311 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDC7O00311 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.46■□□□□ 0.23
CDC7O00311 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDC7O00311 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDC7O00311 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CDC7O00311 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDC7O00311 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDC7O00311 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
CDC7O00311 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
CDC7O00311 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.46■□□□□ 0.22
CDC7O00311 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CDC7O00311 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
CDC7O00311 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
CDC7O00311 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CDC7O00311 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
CDC7O00311 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.22
CDC7O00311 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CDC7O00311 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDC7O00311 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDC7O00311 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC16.45■□□□□ 0.22
CDC7O00311 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
CDC7O00311 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDC7O00311 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CDC7O00311 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDC7O00311 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDC7O00311 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.45■□□□□ 0.22
CDC7O00311 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDC7O00311 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CDC7O00311 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDC7O00311 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDC7O00311 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC16.45■□□□□ 0.22
CDC7O00311 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC16.45■□□□□ 0.22
CDC7O00311 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
CDC7O00311 AL450487.1-201ENST00000426799 995 ntBASIC16.45■□□□□ 0.22
CDC7O00311 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CDC7O00311 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC16.45■□□□□ 0.22
CDC7O00311 CIPC-205ENST00000555437 566 ntTSL 3 BASIC16.45■□□□□ 0.22
CDC7O00311 RPS29-206ENST00000557111 488 ntTSL 2 BASIC16.45■□□□□ 0.22
CDC7O00311 AL049840.3-201ENST00000602669 611 ntBASIC16.45■□□□□ 0.22
CDC7O00311 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC16.45■□□□□ 0.22
CDC7O00311 FAM215A-202ENST00000632077 792 ntBASIC16.45■□□□□ 0.22
CDC7O00311 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC16.45■□□□□ 0.22
CDC7O00311 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
CDC7O00311 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDC7O00311 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDC7O00311 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CDC7O00311 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDC7O00311 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
CDC7O00311 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CDC7O00311 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.45■□□□□ 0.22
CDC7O00311 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDC7O00311 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDC7O00311 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CDC7O00311 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CDC7O00311 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CDC7O00311 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.45■□□□□ 0.22
CDC7O00311 KRT8P39-201ENST00000396270 1433 ntBASIC16.45■□□□□ 0.22
CDC7O00311 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CDC7O00311 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDC7O00311 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms