Protein–RNA interactions for Protein: K7ERE1

TMEM256-PLSCR3, TMEM256-PLSCR3 readthrough (NMD candidate), humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM256-PLSCR3K7ERE1 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 PPP1R14BP2-201ENST00000426284 444 ntBASIC10.65□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 AL353807.1-201ENST00000427475 662 ntBASIC10.65□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC10.65□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC10.65□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 RPS2P4-201ENST00000476944 856 ntBASIC10.65□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 LGR4-203ENST00000480977 492 ntTSL 2 BASIC10.65□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 WWOX-216ENST00000569818 525 ntBASIC10.65□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC10.65□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC10.65□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC10.65□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC10.65□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 AMT-206ENST00000458307 1860 ntTSL 2 BASIC10.65□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC10.65□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC10.65□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 SP100-205ENST00000409824 1802 ntTSL 5 BASIC10.65□□□□□ -0.71
TMEM256-PLSCR3K7ERE1 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
TMEM256-PLSCR3K7ERE1 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC10.65□□□□□ -0.71
TMEM256-PLSCR3K7ERE1 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC10.65□□□□□ -0.71
TMEM256-PLSCR3K7ERE1 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
TMEM256-PLSCR3K7ERE1 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
TMEM256-PLSCR3K7ERE1 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.71
TMEM256-PLSCR3K7ERE1 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC10.65□□□□□ -0.71
TMEM256-PLSCR3K7ERE1 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.71
TMEM256-PLSCR3K7ERE1 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC10.65□□□□□ -0.71
TMEM256-PLSCR3K7ERE1 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC10.64□□□□□ -0.71
TMEM256-PLSCR3K7ERE1 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
TMEM256-PLSCR3K7ERE1 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC10.64□□□□□ -0.71
TMEM256-PLSCR3K7ERE1 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC10.64□□□□□ -0.71
TMEM256-PLSCR3K7ERE1 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
TMEM256-PLSCR3K7ERE1 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
TMEM256-PLSCR3K7ERE1 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC10.64□□□□□ -0.71
TMEM256-PLSCR3K7ERE1 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC10.64□□□□□ -0.71
TMEM256-PLSCR3K7ERE1 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
TMEM256-PLSCR3K7ERE1 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC10.64□□□□□ -0.71
TMEM256-PLSCR3K7ERE1 GRK6P1-201ENST00000400595 1711 ntBASIC10.64□□□□□ -0.71
TMEM256-PLSCR3K7ERE1 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
TMEM256-PLSCR3K7ERE1 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
TMEM256-PLSCR3K7ERE1 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
TMEM256-PLSCR3K7ERE1 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
TMEM256-PLSCR3K7ERE1 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
TMEM256-PLSCR3K7ERE1 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
TMEM256-PLSCR3K7ERE1 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
TMEM256-PLSCR3K7ERE1 AL731571.1-201ENST00000617058 5428 ntBASIC10.64□□□□□ -0.71
TMEM256-PLSCR3K7ERE1 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
TMEM256-PLSCR3K7ERE1 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
TMEM256-PLSCR3K7ERE1 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC10.64□□□□□ -0.71
TMEM256-PLSCR3K7ERE1 CICP13-201ENST00000422015 2789 ntBASIC10.64□□□□□ -0.71
TMEM256-PLSCR3K7ERE1 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
TMEM256-PLSCR3K7ERE1 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
TMEM256-PLSCR3K7ERE1 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC10.64□□□□□ -0.71
TMEM256-PLSCR3K7ERE1 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC10.64□□□□□ -0.71
TMEM256-PLSCR3K7ERE1 FSCN1P1-201ENST00000568912 1481 ntBASIC10.64□□□□□ -0.71
TMEM256-PLSCR3K7ERE1 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
TMEM256-PLSCR3K7ERE1 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
TMEM256-PLSCR3K7ERE1 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
TMEM256-PLSCR3K7ERE1 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
TMEM256-PLSCR3K7ERE1 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC10.64□□□□□ -0.71
TMEM256-PLSCR3K7ERE1 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC10.64□□□□□ -0.71
TMEM256-PLSCR3K7ERE1 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC10.64□□□□□ -0.71
TMEM256-PLSCR3K7ERE1 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC10.64□□□□□ -0.71
TMEM256-PLSCR3K7ERE1 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC10.64□□□□□ -0.71
TMEM256-PLSCR3K7ERE1 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC10.64□□□□□ -0.71
TMEM256-PLSCR3K7ERE1 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC10.64□□□□□ -0.71
TMEM256-PLSCR3K7ERE1 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC10.64□□□□□ -0.71
TMEM256-PLSCR3K7ERE1 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC10.64□□□□□ -0.71
TMEM256-PLSCR3K7ERE1 MIR6786-201ENST00000616843 113 ntBASIC10.64□□□□□ -0.71
TMEM256-PLSCR3K7ERE1 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC10.64□□□□□ -0.71
TMEM256-PLSCR3K7ERE1 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC10.64□□□□□ -0.71
TMEM256-PLSCR3K7ERE1 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
TMEM256-PLSCR3K7ERE1 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
TMEM256-PLSCR3K7ERE1 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC10.64□□□□□ -0.71
TMEM256-PLSCR3K7ERE1 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
TMEM256-PLSCR3K7ERE1 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC10.64□□□□□ -0.71
TMEM256-PLSCR3K7ERE1 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
TMEM256-PLSCR3K7ERE1 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
TMEM256-PLSCR3K7ERE1 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
TMEM256-PLSCR3K7ERE1 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC10.64□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms