Protein–RNA interactions for Protein: A8MV65

VGLL3, Transcription cofactor vestigial-like protein 3, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL3A8MV65 KRT17P1-201ENST00000399211 1546 ntBASIC16.48■□□□□ 0.23
VGLL3A8MV65 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
VGLL3A8MV65 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
VGLL3A8MV65 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC16.48■□□□□ 0.23
VGLL3A8MV65 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
VGLL3A8MV65 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
VGLL3A8MV65 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
VGLL3A8MV65 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
VGLL3A8MV65 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
VGLL3A8MV65 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
VGLL3A8MV65 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
VGLL3A8MV65 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
VGLL3A8MV65 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
VGLL3A8MV65 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC16.48■□□□□ 0.23
VGLL3A8MV65 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC16.48■□□□□ 0.23
VGLL3A8MV65 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC16.48■□□□□ 0.23
VGLL3A8MV65 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
VGLL3A8MV65 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
VGLL3A8MV65 SPTSSB-201ENST00000359175 3103 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
VGLL3A8MV65 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
VGLL3A8MV65 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
VGLL3A8MV65 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC16.47■□□□□ 0.23
VGLL3A8MV65 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
VGLL3A8MV65 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
VGLL3A8MV65 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
VGLL3A8MV65 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.47■□□□□ 0.23
VGLL3A8MV65 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.47■□□□□ 0.23
VGLL3A8MV65 C9orf106-201ENST00000316786 3145 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
VGLL3A8MV65 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.47■□□□□ 0.23
VGLL3A8MV65 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
VGLL3A8MV65 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
VGLL3A8MV65 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
VGLL3A8MV65 AL355472.2-201ENST00000422958 438 ntBASIC16.47■□□□□ 0.23
VGLL3A8MV65 DUSP5P2-201ENST00000426873 1033 ntBASIC16.47■□□□□ 0.23
VGLL3A8MV65 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC16.47■□□□□ 0.23
VGLL3A8MV65 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
VGLL3A8MV65 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC16.47■□□□□ 0.23
VGLL3A8MV65 CD99P1-205ENST00000527459 561 ntBASIC16.47■□□□□ 0.23
VGLL3A8MV65 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
VGLL3A8MV65 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC16.47■□□□□ 0.23
VGLL3A8MV65 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
VGLL3A8MV65 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC16.47■□□□□ 0.23
VGLL3A8MV65 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
VGLL3A8MV65 ZIK1-204ENST00000597850 4181 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
VGLL3A8MV65 MSH2-201ENST00000233146 3307 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
VGLL3A8MV65 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC16.47■□□□□ 0.23
VGLL3A8MV65 CYB561D1-206ENST00000496961 3424 ntTSL 2 BASIC16.47■□□□□ 0.23
VGLL3A8MV65 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
VGLL3A8MV65 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
VGLL3A8MV65 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
VGLL3A8MV65 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
VGLL3A8MV65 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
VGLL3A8MV65 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
VGLL3A8MV65 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC16.47■□□□□ 0.23
VGLL3A8MV65 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
VGLL3A8MV65 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC16.47■□□□□ 0.23
VGLL3A8MV65 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
VGLL3A8MV65 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
VGLL3A8MV65 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
VGLL3A8MV65 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
VGLL3A8MV65 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
VGLL3A8MV65 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
VGLL3A8MV65 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC16.47■□□□□ 0.23
VGLL3A8MV65 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
VGLL3A8MV65 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
VGLL3A8MV65 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.46■□□□□ 0.23
VGLL3A8MV65 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
VGLL3A8MV65 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
VGLL3A8MV65 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
VGLL3A8MV65 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
VGLL3A8MV65 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.46■□□□□ 0.23
VGLL3A8MV65 COX6B2-210ENST00000593184 2083 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
VGLL3A8MV65 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC16.46■□□□□ 0.23
VGLL3A8MV65 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
VGLL3A8MV65 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
VGLL3A8MV65 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
VGLL3A8MV65 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC16.46■□□□□ 0.23
VGLL3A8MV65 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
VGLL3A8MV65 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC16.46■□□□□ 0.23
VGLL3A8MV65 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
VGLL3A8MV65 AC105020.6-201ENST00000621523 1217 ntBASIC16.46■□□□□ 0.23
VGLL3A8MV65 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
VGLL3A8MV65 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
VGLL3A8MV65 BEND3P1-201ENST00000421591 1944 ntBASIC16.46■□□□□ 0.23
VGLL3A8MV65 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC16.46■□□□□ 0.23
VGLL3A8MV65 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC16.46■□□□□ 0.23
VGLL3A8MV65 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
VGLL3A8MV65 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
VGLL3A8MV65 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
VGLL3A8MV65 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC16.46■□□□□ 0.23
VGLL3A8MV65 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC16.46■□□□□ 0.23
VGLL3A8MV65 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
VGLL3A8MV65 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
VGLL3A8MV65 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
VGLL3A8MV65 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
VGLL3A8MV65 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
VGLL3A8MV65 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
VGLL3A8MV65 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
VGLL3A8MV65 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
VGLL3A8MV65 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms