Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TBC1D3FA6NER0 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TBC1D3FA6NER0 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TBC1D3FA6NER0 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TBC1D3FA6NER0 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TBC1D3FA6NER0 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TBC1D3FA6NER0 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
TBC1D3FA6NER0 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TBC1D3FA6NER0 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.66■□□□□ 0.26
TBC1D3FA6NER0 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TBC1D3FA6NER0 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
TBC1D3FA6NER0 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
TBC1D3FA6NER0 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
TBC1D3FA6NER0 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TBC1D3FA6NER0 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
TBC1D3FA6NER0 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TBC1D3FA6NER0 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC16.66■□□□□ 0.26
TBC1D3FA6NER0 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TBC1D3FA6NER0 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TBC1D3FA6NER0 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TBC1D3FA6NER0 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TBC1D3FA6NER0 SPDYE7P-202ENST00000420373 878 ntBASIC16.66■□□□□ 0.26
TBC1D3FA6NER0 KLF2P3-201ENST00000451977 1087 ntBASIC16.66■□□□□ 0.26
TBC1D3FA6NER0 AC093214.1-201ENST00000511688 1107 ntBASIC16.66■□□□□ 0.26
TBC1D3FA6NER0 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TBC1D3FA6NER0 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
TBC1D3FA6NER0 AP000842.3-202ENST00000569238 1080 ntBASIC16.66■□□□□ 0.26
TBC1D3FA6NER0 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TBC1D3FA6NER0 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC16.66■□□□□ 0.26
TBC1D3FA6NER0 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC16.66■□□□□ 0.26
TBC1D3FA6NER0 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TBC1D3FA6NER0 RAB34-224ENST00000636513 888 ntTSL 5 BASIC16.66■□□□□ 0.26
TBC1D3FA6NER0 AC084121.4-201ENST00000641598 221 ntBASIC16.66■□□□□ 0.26
TBC1D3FA6NER0 AF228730.8-201ENST00000642140 221 ntBASIC16.66■□□□□ 0.26
TBC1D3FA6NER0 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TBC1D3FA6NER0 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TBC1D3FA6NER0 PP12613-201ENST00000424958 2230 ntBASIC16.66■□□□□ 0.26
TBC1D3FA6NER0 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TBC1D3FA6NER0 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TBC1D3FA6NER0 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TBC1D3FA6NER0 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TBC1D3FA6NER0 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TBC1D3FA6NER0 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TBC1D3FA6NER0 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.66■□□□□ 0.26
TBC1D3FA6NER0 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.66■□□□□ 0.26
TBC1D3FA6NER0 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TBC1D3FA6NER0 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.66■□□□□ 0.26
TBC1D3FA6NER0 NARF-206ENST00000457415 1668 ntTSL 5 BASIC16.65■□□□□ 0.26
TBC1D3FA6NER0 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.65■□□□□ 0.26
TBC1D3FA6NER0 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.65■□□□□ 0.26
TBC1D3FA6NER0 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
TBC1D3FA6NER0 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TBC1D3FA6NER0 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC16.65■□□□□ 0.26
TBC1D3FA6NER0 AC092068.3-201ENST00000587894 2016 ntBASIC16.65■□□□□ 0.26
TBC1D3FA6NER0 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TBC1D3FA6NER0 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TBC1D3FA6NER0 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.65■□□□□ 0.26
TBC1D3FA6NER0 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TBC1D3FA6NER0 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TBC1D3FA6NER0 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.65■□□□□ 0.26
TBC1D3FA6NER0 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TBC1D3FA6NER0 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
TBC1D3FA6NER0 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC16.65■□□□□ 0.26
TBC1D3FA6NER0 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TBC1D3FA6NER0 MIR943-201ENST00000401286 94 ntBASIC16.65■□□□□ 0.26
TBC1D3FA6NER0 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.65■□□□□ 0.26
TBC1D3FA6NER0 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TBC1D3FA6NER0 BCRP1-201ENST00000444246 691 ntBASIC16.65■□□□□ 0.26
TBC1D3FA6NER0 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC16.65■□□□□ 0.26
TBC1D3FA6NER0 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TBC1D3FA6NER0 KRT18P34-201ENST00000488218 1270 ntBASIC16.65■□□□□ 0.26
TBC1D3FA6NER0 RNA5SP421-201ENST00000516864 134 ntBASIC16.65■□□□□ 0.26
TBC1D3FA6NER0 ALG1L8P-201ENST00000533887 760 ntBASIC16.65■□□□□ 0.26
TBC1D3FA6NER0 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC16.65■□□□□ 0.26
TBC1D3FA6NER0 AL138918.1-201ENST00000568306 659 ntBASIC16.65■□□□□ 0.26
TBC1D3FA6NER0 AC051619.7-201ENST00000568314 623 ntBASIC16.65■□□□□ 0.26
TBC1D3FA6NER0 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC16.65■□□□□ 0.26
TBC1D3FA6NER0 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TBC1D3FA6NER0 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC16.65■□□□□ 0.26
TBC1D3FA6NER0 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.65■□□□□ 0.26
TBC1D3FA6NER0 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TBC1D3FA6NER0 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.65■□□□□ 0.26
TBC1D3FA6NER0 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TBC1D3FA6NER0 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TBC1D3FA6NER0 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
TBC1D3FA6NER0 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
TBC1D3FA6NER0 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
TBC1D3FA6NER0 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TBC1D3FA6NER0 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TBC1D3FA6NER0 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC16.65■□□□□ 0.26
TBC1D3FA6NER0 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
TBC1D3FA6NER0 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TBC1D3FA6NER0 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
TBC1D3FA6NER0 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
TBC1D3FA6NER0 AC008677.1-201ENST00000519230 1561 ntBASIC16.64■□□□□ 0.25
TBC1D3FA6NER0 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TBC1D3FA6NER0 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TBC1D3FA6NER0 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.64■□□□□ 0.25
TBC1D3FA6NER0 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
TBC1D3FA6NER0 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms