Protein–RNA interactions for Protein: A6NDR6

MEIS3P1, Putative homeobox protein Meis3-like 1, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3P1A6NDR6 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.44□□□□□ -0.1
MEIS3P1A6NDR6 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
MEIS3P1A6NDR6 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC14.44□□□□□ -0.1
MEIS3P1A6NDR6 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
MEIS3P1A6NDR6 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC14.44□□□□□ -0.1
MEIS3P1A6NDR6 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
MEIS3P1A6NDR6 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
MEIS3P1A6NDR6 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC14.44□□□□□ -0.1
MEIS3P1A6NDR6 AC104640.1-201ENST00000562617 2109 ntBASIC14.44□□□□□ -0.1
MEIS3P1A6NDR6 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
MEIS3P1A6NDR6 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.44□□□□□ -0.1
MEIS3P1A6NDR6 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
MEIS3P1A6NDR6 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC14.44□□□□□ -0.1
MEIS3P1A6NDR6 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
MEIS3P1A6NDR6 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
MEIS3P1A6NDR6 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
MEIS3P1A6NDR6 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
MEIS3P1A6NDR6 COPE-203ENST00000351079 907 ntTSL 2 BASIC14.44□□□□□ -0.1
MEIS3P1A6NDR6 ANKRD20A18P-201ENST00000359341 492 ntBASIC14.44□□□□□ -0.1
MEIS3P1A6NDR6 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
MEIS3P1A6NDR6 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC14.44□□□□□ -0.1
MEIS3P1A6NDR6 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
MEIS3P1A6NDR6 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC14.44□□□□□ -0.1
MEIS3P1A6NDR6 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
MEIS3P1A6NDR6 STK19B-204ENST00000512515 211 ntBASIC14.44□□□□□ -0.1
MEIS3P1A6NDR6 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC14.44□□□□□ -0.1
MEIS3P1A6NDR6 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC14.44□□□□□ -0.1
MEIS3P1A6NDR6 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC14.44□□□□□ -0.1
MEIS3P1A6NDR6 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
MEIS3P1A6NDR6 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC14.44□□□□□ -0.1
MEIS3P1A6NDR6 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.44□□□□□ -0.1
MEIS3P1A6NDR6 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC14.44□□□□□ -0.1
MEIS3P1A6NDR6 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
MEIS3P1A6NDR6 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
MEIS3P1A6NDR6 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
MEIS3P1A6NDR6 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
MEIS3P1A6NDR6 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
MEIS3P1A6NDR6 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
MEIS3P1A6NDR6 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
MEIS3P1A6NDR6 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
MEIS3P1A6NDR6 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
MEIS3P1A6NDR6 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
MEIS3P1A6NDR6 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
MEIS3P1A6NDR6 AC006538.1-201ENST00000567905 1585 ntBASIC14.43□□□□□ -0.1
MEIS3P1A6NDR6 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.43□□□□□ -0.1
MEIS3P1A6NDR6 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
MEIS3P1A6NDR6 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
MEIS3P1A6NDR6 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
MEIS3P1A6NDR6 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
MEIS3P1A6NDR6 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
MEIS3P1A6NDR6 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
MEIS3P1A6NDR6 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
MEIS3P1A6NDR6 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
MEIS3P1A6NDR6 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
MEIS3P1A6NDR6 MIR662-201ENST00000384847 95 ntBASIC14.43□□□□□ -0.1
MEIS3P1A6NDR6 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC14.43□□□□□ -0.1
MEIS3P1A6NDR6 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
MEIS3P1A6NDR6 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC14.43□□□□□ -0.1
MEIS3P1A6NDR6 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
MEIS3P1A6NDR6 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC14.43□□□□□ -0.1
MEIS3P1A6NDR6 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC14.43□□□□□ -0.1
MEIS3P1A6NDR6 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC14.43□□□□□ -0.1
MEIS3P1A6NDR6 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC14.43□□□□□ -0.1
MEIS3P1A6NDR6 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
MEIS3P1A6NDR6 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
MEIS3P1A6NDR6 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
MEIS3P1A6NDR6 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
MEIS3P1A6NDR6 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
MEIS3P1A6NDR6 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC14.43□□□□□ -0.1
MEIS3P1A6NDR6 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
MEIS3P1A6NDR6 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
MEIS3P1A6NDR6 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14.43□□□□□ -0.1
MEIS3P1A6NDR6 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
MEIS3P1A6NDR6 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC14.43□□□□□ -0.1
MEIS3P1A6NDR6 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
MEIS3P1A6NDR6 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
MEIS3P1A6NDR6 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
MEIS3P1A6NDR6 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
MEIS3P1A6NDR6 MST1L-201ENST00000442552 2185 ntBASIC14.43□□□□□ -0.1
MEIS3P1A6NDR6 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
MEIS3P1A6NDR6 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
MEIS3P1A6NDR6 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.43□□□□□ -0.1
MEIS3P1A6NDR6 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC14.43□□□□□ -0.1
MEIS3P1A6NDR6 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
MEIS3P1A6NDR6 AC009336.1-201ENST00000608941 1553 ntBASIC14.43□□□□□ -0.1
MEIS3P1A6NDR6 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
MEIS3P1A6NDR6 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
MEIS3P1A6NDR6 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
MEIS3P1A6NDR6 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
MEIS3P1A6NDR6 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
MEIS3P1A6NDR6 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
MEIS3P1A6NDR6 PRAL-201ENST00000624952 3286 ntBASIC14.42□□□□□ -0.1
MEIS3P1A6NDR6 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
MEIS3P1A6NDR6 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
MEIS3P1A6NDR6 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
MEIS3P1A6NDR6 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
MEIS3P1A6NDR6 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
MEIS3P1A6NDR6 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
MEIS3P1A6NDR6 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
MEIS3P1A6NDR6 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms