Protein–RNA interactions for Protein: A6NDA9

LRIT2, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2A6NDA9 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
LRIT2A6NDA9 AL139384.1-201ENST00000612143 3047 ntBASIC15.93■□□□□ 0.14
LRIT2A6NDA9 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
LRIT2A6NDA9 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC15.93■□□□□ 0.14
LRIT2A6NDA9 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRIT2A6NDA9 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRIT2A6NDA9 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRIT2A6NDA9 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
LRIT2A6NDA9 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRIT2A6NDA9 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
LRIT2A6NDA9 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRIT2A6NDA9 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC15.93■□□□□ 0.14
LRIT2A6NDA9 STARD13-205ENST00000439831 945 ntTSL 2 BASIC15.93■□□□□ 0.14
LRIT2A6NDA9 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC15.93■□□□□ 0.14
LRIT2A6NDA9 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC15.93■□□□□ 0.14
LRIT2A6NDA9 KRT19P2-202ENST00000557173 1012 ntBASIC15.93■□□□□ 0.14
LRIT2A6NDA9 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC15.93■□□□□ 0.14
LRIT2A6NDA9 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRIT2A6NDA9 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC15.93■□□□□ 0.14
LRIT2A6NDA9 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC15.93■□□□□ 0.14
LRIT2A6NDA9 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC15.93■□□□□ 0.14
LRIT2A6NDA9 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRIT2A6NDA9 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
LRIT2A6NDA9 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRIT2A6NDA9 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
LRIT2A6NDA9 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC15.93■□□□□ 0.14
LRIT2A6NDA9 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
LRIT2A6NDA9 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRIT2A6NDA9 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC15.93■□□□□ 0.14
LRIT2A6NDA9 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LRIT2A6NDA9 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
LRIT2A6NDA9 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
LRIT2A6NDA9 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LRIT2A6NDA9 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
LRIT2A6NDA9 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LRIT2A6NDA9 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LRIT2A6NDA9 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC15.92■□□□□ 0.14
LRIT2A6NDA9 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
LRIT2A6NDA9 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LRIT2A6NDA9 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
LRIT2A6NDA9 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LRIT2A6NDA9 RNU1-129P-201ENST00000384064 167 ntBASIC15.92■□□□□ 0.14
LRIT2A6NDA9 FALEC-201ENST00000416894 566 ntTSL 3 BASIC15.92■□□□□ 0.14
LRIT2A6NDA9 HNRNPA1P28-201ENST00000424481 961 ntBASIC15.92■□□□□ 0.14
LRIT2A6NDA9 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LRIT2A6NDA9 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC15.92■□□□□ 0.14
LRIT2A6NDA9 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC15.92■□□□□ 0.14
LRIT2A6NDA9 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC15.92■□□□□ 0.14
LRIT2A6NDA9 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
LRIT2A6NDA9 U1.21-201ENST00000580816 167 ntBASIC15.92■□□□□ 0.14
LRIT2A6NDA9 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC15.92■□□□□ 0.14
LRIT2A6NDA9 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
LRIT2A6NDA9 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LRIT2A6NDA9 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC15.92■□□□□ 0.14
LRIT2A6NDA9 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LRIT2A6NDA9 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LRIT2A6NDA9 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
LRIT2A6NDA9 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LRIT2A6NDA9 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LRIT2A6NDA9 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LRIT2A6NDA9 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LRIT2A6NDA9 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC15.92■□□□□ 0.14
LRIT2A6NDA9 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
LRIT2A6NDA9 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC15.92■□□□□ 0.14
LRIT2A6NDA9 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
LRIT2A6NDA9 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
LRIT2A6NDA9 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
LRIT2A6NDA9 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRIT2A6NDA9 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRIT2A6NDA9 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LRIT2A6NDA9 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
LRIT2A6NDA9 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRIT2A6NDA9 AL031731.1-201ENST00000642131 2094 ntBASIC15.91■□□□□ 0.14
LRIT2A6NDA9 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LRIT2A6NDA9 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
LRIT2A6NDA9 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC15.91■□□□□ 0.14
LRIT2A6NDA9 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRIT2A6NDA9 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC15.91■□□□□ 0.14
LRIT2A6NDA9 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRIT2A6NDA9 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRIT2A6NDA9 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRIT2A6NDA9 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
LRIT2A6NDA9 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LRIT2A6NDA9 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRIT2A6NDA9 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC15.91■□□□□ 0.14
LRIT2A6NDA9 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC15.91■□□□□ 0.14
LRIT2A6NDA9 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LRIT2A6NDA9 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
LRIT2A6NDA9 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LRIT2A6NDA9 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC15.91■□□□□ 0.14
LRIT2A6NDA9 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
LRIT2A6NDA9 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC15.91■□□□□ 0.14
LRIT2A6NDA9 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC15.91■□□□□ 0.14
LRIT2A6NDA9 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC15.91■□□□□ 0.14
LRIT2A6NDA9 KRT18P58-201ENST00000527480 1120 ntBASIC15.91■□□□□ 0.14
LRIT2A6NDA9 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC15.91■□□□□ 0.14
LRIT2A6NDA9 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
LRIT2A6NDA9 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC15.91■□□□□ 0.14
LRIT2A6NDA9 MED16-214ENST00000617672 554 ntTSL 5 BASIC15.91■□□□□ 0.14
LRIT2A6NDA9 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms