Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
TRBV5-4A0A0C4DH59 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRBV5-4A0A0C4DH59 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRBV5-4A0A0C4DH59 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRBV5-4A0A0C4DH59 AC002056.1-201ENST00000395613 760 ntBASIC16.44■□□□□ 0.22
TRBV5-4A0A0C4DH59 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRBV5-4A0A0C4DH59 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRBV5-4A0A0C4DH59 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRBV5-4A0A0C4DH59 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC16.44■□□□□ 0.22
TRBV5-4A0A0C4DH59 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRBV5-4A0A0C4DH59 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRBV5-4A0A0C4DH59 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC16.44■□□□□ 0.22
TRBV5-4A0A0C4DH59 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.44■□□□□ 0.22
TRBV5-4A0A0C4DH59 AC099522.2-201ENST00000607001 744 ntBASIC16.44■□□□□ 0.22
TRBV5-4A0A0C4DH59 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRBV5-4A0A0C4DH59 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRBV5-4A0A0C4DH59 LINC01144-201ENST00000626198 1710 ntBASIC16.44■□□□□ 0.22
TRBV5-4A0A0C4DH59 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
TRBV5-4A0A0C4DH59 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRBV5-4A0A0C4DH59 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRBV5-4A0A0C4DH59 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
TRBV5-4A0A0C4DH59 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRBV5-4A0A0C4DH59 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRBV5-4A0A0C4DH59 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
TRBV5-4A0A0C4DH59 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
TRBV5-4A0A0C4DH59 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRBV5-4A0A0C4DH59 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRBV5-4A0A0C4DH59 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRBV5-4A0A0C4DH59 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.44■□□□□ 0.22
TRBV5-4A0A0C4DH59 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16.43■□□□□ 0.22
TRBV5-4A0A0C4DH59 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRBV5-4A0A0C4DH59 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC16.43■□□□□ 0.22
TRBV5-4A0A0C4DH59 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
TRBV5-4A0A0C4DH59 OR6D1P-202ENST00000641007 5290 ntBASIC16.43■□□□□ 0.22
TRBV5-4A0A0C4DH59 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRBV5-4A0A0C4DH59 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
TRBV5-4A0A0C4DH59 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRBV5-4A0A0C4DH59 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRBV5-4A0A0C4DH59 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRBV5-4A0A0C4DH59 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.43■□□□□ 0.22
TRBV5-4A0A0C4DH59 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRBV5-4A0A0C4DH59 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRBV5-4A0A0C4DH59 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRBV5-4A0A0C4DH59 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRBV5-4A0A0C4DH59 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.43■□□□□ 0.22
TRBV5-4A0A0C4DH59 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC16.43■□□□□ 0.22
TRBV5-4A0A0C4DH59 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC16.43■□□□□ 0.22
TRBV5-4A0A0C4DH59 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
TRBV5-4A0A0C4DH59 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC16.43■□□□□ 0.22
TRBV5-4A0A0C4DH59 AC112191.1-201ENST00000523689 701 ntBASIC16.43■□□□□ 0.22
TRBV5-4A0A0C4DH59 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC16.43■□□□□ 0.22
TRBV5-4A0A0C4DH59 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC16.43■□□□□ 0.22
TRBV5-4A0A0C4DH59 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC16.43■□□□□ 0.22
TRBV5-4A0A0C4DH59 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC16.43■□□□□ 0.22
TRBV5-4A0A0C4DH59 AL078644.1-201ENST00000609881 752 ntBASIC16.43■□□□□ 0.22
TRBV5-4A0A0C4DH59 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRBV5-4A0A0C4DH59 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.43■□□□□ 0.22
TRBV5-4A0A0C4DH59 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRBV5-4A0A0C4DH59 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.43■□□□□ 0.22
TRBV5-4A0A0C4DH59 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
TRBV5-4A0A0C4DH59 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC16.43■□□□□ 0.22
TRBV5-4A0A0C4DH59 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRBV5-4A0A0C4DH59 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRBV5-4A0A0C4DH59 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRBV5-4A0A0C4DH59 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.42■□□□□ 0.22
TRBV5-4A0A0C4DH59 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC16.42■□□□□ 0.22
TRBV5-4A0A0C4DH59 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.42■□□□□ 0.22
TRBV5-4A0A0C4DH59 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRBV5-4A0A0C4DH59 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
TRBV5-4A0A0C4DH59 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRBV5-4A0A0C4DH59 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRBV5-4A0A0C4DH59 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.42■□□□□ 0.22
TRBV5-4A0A0C4DH59 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRBV5-4A0A0C4DH59 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC16.42■□□□□ 0.22
TRBV5-4A0A0C4DH59 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC16.42■□□□□ 0.22
TRBV5-4A0A0C4DH59 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
TRBV5-4A0A0C4DH59 CFL1-202ENST00000524553 860 ntTSL 2 BASIC16.42■□□□□ 0.22
TRBV5-4A0A0C4DH59 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC16.42■□□□□ 0.22
TRBV5-4A0A0C4DH59 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC16.42■□□□□ 0.22
TRBV5-4A0A0C4DH59 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC16.42■□□□□ 0.22
TRBV5-4A0A0C4DH59 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRBV5-4A0A0C4DH59 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRBV5-4A0A0C4DH59 AC091812.2-201ENST00000619081 385 ntBASIC16.42■□□□□ 0.22
TRBV5-4A0A0C4DH59 AL161645.1-201ENST00000622716 1255 ntBASIC16.42■□□□□ 0.22
TRBV5-4A0A0C4DH59 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRBV5-4A0A0C4DH59 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRBV5-4A0A0C4DH59 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRBV5-4A0A0C4DH59 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
TRBV5-4A0A0C4DH59 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.42■□□□□ 0.22
TRBV5-4A0A0C4DH59 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC16.42■□□□□ 0.22
TRBV5-4A0A0C4DH59 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.42■□□□□ 0.22
TRBV5-4A0A0C4DH59 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRBV5-4A0A0C4DH59 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.42■□□□□ 0.22
TRBV5-4A0A0C4DH59 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.41■□□□□ 0.22
TRBV5-4A0A0C4DH59 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.41■□□□□ 0.22
TRBV5-4A0A0C4DH59 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
TRBV5-4A0A0C4DH59 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
TRBV5-4A0A0C4DH59 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRBV5-4A0A0C4DH59 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRBV5-4A0A0C4DH59 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms