Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC24.92■■□□□ 1.58
CDC42BPBQ9Y5S2 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
CDC42BPBQ9Y5S2 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
CDC42BPBQ9Y5S2 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC24.92■■□□□ 1.58
CDC42BPBQ9Y5S2 HIST1H2BPS3-201ENST00000419683 341 ntBASIC24.92■■□□□ 1.58
CDC42BPBQ9Y5S2 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC24.92■■□□□ 1.58
CDC42BPBQ9Y5S2 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
CDC42BPBQ9Y5S2 MYCLP2-201ENST00000449268 967 ntBASIC24.92■■□□□ 1.58
CDC42BPBQ9Y5S2 AC022210.1-201ENST00000449856 793 ntBASIC24.92■■□□□ 1.58
CDC42BPBQ9Y5S2 AC093726.1-201ENST00000608064 963 ntBASIC24.92■■□□□ 1.58
CDC42BPBQ9Y5S2 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC24.92■■□□□ 1.58
CDC42BPBQ9Y5S2 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC24.92■■□□□ 1.58
CDC42BPBQ9Y5S2 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC24.91■■□□□ 1.58
CDC42BPBQ9Y5S2 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
CDC42BPBQ9Y5S2 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC24.91■■□□□ 1.58
CDC42BPBQ9Y5S2 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
CDC42BPBQ9Y5S2 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
CDC42BPBQ9Y5S2 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC24.91■■□□□ 1.58
CDC42BPBQ9Y5S2 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
CDC42BPBQ9Y5S2 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC24.91■■□□□ 1.58
CDC42BPBQ9Y5S2 AC011495.1-201ENST00000498085 584 ntBASIC24.91■■□□□ 1.58
CDC42BPBQ9Y5S2 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
CDC42BPBQ9Y5S2 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC24.91■■□□□ 1.58
CDC42BPBQ9Y5S2 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC24.91■■□□□ 1.58
CDC42BPBQ9Y5S2 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC24.91■■□□□ 1.58
CDC42BPBQ9Y5S2 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC24.91■■□□□ 1.58
CDC42BPBQ9Y5S2 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC24.9■■□□□ 1.58
CDC42BPBQ9Y5S2 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
CDC42BPBQ9Y5S2 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC24.9■■□□□ 1.58
CDC42BPBQ9Y5S2 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC24.9■■□□□ 1.58
CDC42BPBQ9Y5S2 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC24.9■■□□□ 1.58
CDC42BPBQ9Y5S2 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
CDC42BPBQ9Y5S2 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC24.9■■□□□ 1.58
CDC42BPBQ9Y5S2 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC24.9■■□□□ 1.58
CDC42BPBQ9Y5S2 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC24.9■■□□□ 1.58
CDC42BPBQ9Y5S2 AL512343.1-201ENST00000605837 169 ntBASIC24.9■■□□□ 1.58
CDC42BPBQ9Y5S2 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
CDC42BPBQ9Y5S2 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC24.9■■□□□ 1.58
CDC42BPBQ9Y5S2 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
CDC42BPBQ9Y5S2 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC24.9■■□□□ 1.58
CDC42BPBQ9Y5S2 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC24.9■■□□□ 1.58
CDC42BPBQ9Y5S2 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
CDC42BPBQ9Y5S2 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
CDC42BPBQ9Y5S2 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC24.9■■□□□ 1.58
CDC42BPBQ9Y5S2 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
CDC42BPBQ9Y5S2 MPV17-208ENST00000405076 603 ntTSL 5 BASIC24.89■■□□□ 1.58
CDC42BPBQ9Y5S2 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC24.89■■□□□ 1.58
CDC42BPBQ9Y5S2 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
CDC42BPBQ9Y5S2 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC24.89■■□□□ 1.58
CDC42BPBQ9Y5S2 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC24.89■■□□□ 1.57
CDC42BPBQ9Y5S2 RELA-227ENST00000615805 2236 ntTSL 5 BASIC24.89■■□□□ 1.57
CDC42BPBQ9Y5S2 AC067852.2-201ENST00000590513 2313 ntBASIC24.89■■□□□ 1.57
CDC42BPBQ9Y5S2 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC24.89■■□□□ 1.57
CDC42BPBQ9Y5S2 AC234783.1-201ENST00000441761 496 ntBASIC24.89■■□□□ 1.57
CDC42BPBQ9Y5S2 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC24.89■■□□□ 1.57
CDC42BPBQ9Y5S2 RHOA-206ENST00000454011 889 ntTSL 2 BASIC24.89■■□□□ 1.57
CDC42BPBQ9Y5S2 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC24.89■■□□□ 1.57
CDC42BPBQ9Y5S2 AC010319.3-201ENST00000597028 470 ntBASIC24.89■■□□□ 1.57
CDC42BPBQ9Y5S2 AC074044.1-201ENST00000609673 707 ntBASIC24.89■■□□□ 1.57
CDC42BPBQ9Y5S2 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC24.89■■□□□ 1.57
CDC42BPBQ9Y5S2 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC24.89■■□□□ 1.57
CDC42BPBQ9Y5S2 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC24.88■■□□□ 1.57
CDC42BPBQ9Y5S2 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
CDC42BPBQ9Y5S2 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC24.88■■□□□ 1.57
CDC42BPBQ9Y5S2 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
CDC42BPBQ9Y5S2 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
CDC42BPBQ9Y5S2 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
CDC42BPBQ9Y5S2 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
CDC42BPBQ9Y5S2 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC24.88■■□□□ 1.57
CDC42BPBQ9Y5S2 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
CDC42BPBQ9Y5S2 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC24.88■■□□□ 1.57
CDC42BPBQ9Y5S2 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC24.88■■□□□ 1.57
CDC42BPBQ9Y5S2 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC24.88■■□□□ 1.57
CDC42BPBQ9Y5S2 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC24.88■■□□□ 1.57
CDC42BPBQ9Y5S2 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC24.88■■□□□ 1.57
CDC42BPBQ9Y5S2 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC24.88■■□□□ 1.57
CDC42BPBQ9Y5S2 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC24.88■■□□□ 1.57
CDC42BPBQ9Y5S2 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC24.88■■□□□ 1.57
CDC42BPBQ9Y5S2 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC24.88■■□□□ 1.57
CDC42BPBQ9Y5S2 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
CDC42BPBQ9Y5S2 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC24.88■■□□□ 1.57
CDC42BPBQ9Y5S2 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC24.88■■□□□ 1.57
CDC42BPBQ9Y5S2 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC24.88■■□□□ 1.57
CDC42BPBQ9Y5S2 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC24.88■■□□□ 1.57
CDC42BPBQ9Y5S2 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
CDC42BPBQ9Y5S2 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
CDC42BPBQ9Y5S2 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
CDC42BPBQ9Y5S2 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
CDC42BPBQ9Y5S2 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
CDC42BPBQ9Y5S2 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC24.87■■□□□ 1.57
CDC42BPBQ9Y5S2 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
CDC42BPBQ9Y5S2 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC24.87■■□□□ 1.57
CDC42BPBQ9Y5S2 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
CDC42BPBQ9Y5S2 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
CDC42BPBQ9Y5S2 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
CDC42BPBQ9Y5S2 HIST3H2BA-201ENST00000436555 524 ntBASIC24.87■■□□□ 1.57
CDC42BPBQ9Y5S2 EEF1DP4-201ENST00000446006 880 ntBASIC24.87■■□□□ 1.57
CDC42BPBQ9Y5S2 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC24.87■■□□□ 1.57
CDC42BPBQ9Y5S2 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC24.87■■□□□ 1.57
CDC42BPBQ9Y5S2 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC24.87■■□□□ 1.57
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms