Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHGA6Q9Y5G7 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHGA6Q9Y5G7 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHGA6Q9Y5G7 PON3-203ENST00000427422 894 ntTSL 3 BASIC16.21■□□□□ 0.19
PCDHGA6Q9Y5G7 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC16.21■□□□□ 0.19
PCDHGA6Q9Y5G7 CCND1-203ENST00000536559 553 ntTSL 3 BASIC16.21■□□□□ 0.19
PCDHGA6Q9Y5G7 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC16.21■□□□□ 0.19
PCDHGA6Q9Y5G7 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC16.21■□□□□ 0.19
PCDHGA6Q9Y5G7 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC16.21■□□□□ 0.19
PCDHGA6Q9Y5G7 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHGA6Q9Y5G7 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHGA6Q9Y5G7 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
PCDHGA6Q9Y5G7 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHGA6Q9Y5G7 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHGA6Q9Y5G7 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.21■□□□□ 0.19
PCDHGA6Q9Y5G7 PI4KAP1-204ENST00000612579 1703 ntBASIC16.21■□□□□ 0.19
PCDHGA6Q9Y5G7 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
PCDHGA6Q9Y5G7 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.21■□□□□ 0.19
PCDHGA6Q9Y5G7 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
PCDHGA6Q9Y5G7 CICP6-201ENST00000457191 2729 ntBASIC16.21■□□□□ 0.19
PCDHGA6Q9Y5G7 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.21■□□□□ 0.18
PCDHGA6Q9Y5G7 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.21■□□□□ 0.18
PCDHGA6Q9Y5G7 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
PCDHGA6Q9Y5G7 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGA6Q9Y5G7 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.2■□□□□ 0.18
PCDHGA6Q9Y5G7 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGA6Q9Y5G7 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGA6Q9Y5G7 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGA6Q9Y5G7 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.2■□□□□ 0.18
PCDHGA6Q9Y5G7 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
PCDHGA6Q9Y5G7 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGA6Q9Y5G7 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.2■□□□□ 0.18
PCDHGA6Q9Y5G7 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC16.2■□□□□ 0.18
PCDHGA6Q9Y5G7 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGA6Q9Y5G7 AC025580.3-201ENST00000617932 1424 ntBASIC16.2■□□□□ 0.18
PCDHGA6Q9Y5G7 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
PCDHGA6Q9Y5G7 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.2■□□□□ 0.18
PCDHGA6Q9Y5G7 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGA6Q9Y5G7 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.2■□□□□ 0.18
PCDHGA6Q9Y5G7 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGA6Q9Y5G7 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
PCDHGA6Q9Y5G7 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGA6Q9Y5G7 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.2■□□□□ 0.18
PCDHGA6Q9Y5G7 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
PCDHGA6Q9Y5G7 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGA6Q9Y5G7 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC16.2■□□□□ 0.18
PCDHGA6Q9Y5G7 CXCL1P1-201ENST00000502804 216 ntBASIC16.2■□□□□ 0.18
PCDHGA6Q9Y5G7 RFPL4AP1-201ENST00000530883 850 ntBASIC16.2■□□□□ 0.18
PCDHGA6Q9Y5G7 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
PCDHGA6Q9Y5G7 AL031432.2-201ENST00000566714 459 ntBASIC16.2■□□□□ 0.18
PCDHGA6Q9Y5G7 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.2■□□□□ 0.18
PCDHGA6Q9Y5G7 AL928711.1-201ENST00000570165 459 ntBASIC16.2■□□□□ 0.18
PCDHGA6Q9Y5G7 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC16.2■□□□□ 0.18
PCDHGA6Q9Y5G7 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGA6Q9Y5G7 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
PCDHGA6Q9Y5G7 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
PCDHGA6Q9Y5G7 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGA6Q9Y5G7 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGA6Q9Y5G7 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
PCDHGA6Q9Y5G7 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC16.2■□□□□ 0.18
PCDHGA6Q9Y5G7 AC008894.3-201ENST00000624324 3103 ntBASIC16.2■□□□□ 0.18
PCDHGA6Q9Y5G7 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGA6Q9Y5G7 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGA6Q9Y5G7 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.2■□□□□ 0.18
PCDHGA6Q9Y5G7 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGA6Q9Y5G7 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.2■□□□□ 0.18
PCDHGA6Q9Y5G7 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGA6Q9Y5G7 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGA6Q9Y5G7 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGA6Q9Y5G7 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGA6Q9Y5G7 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC16.19■□□□□ 0.18
PCDHGA6Q9Y5G7 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGA6Q9Y5G7 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.19■□□□□ 0.18
PCDHGA6Q9Y5G7 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGA6Q9Y5G7 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
PCDHGA6Q9Y5G7 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGA6Q9Y5G7 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGA6Q9Y5G7 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGA6Q9Y5G7 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGA6Q9Y5G7 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.19■□□□□ 0.18
PCDHGA6Q9Y5G7 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.19■□□□□ 0.18
PCDHGA6Q9Y5G7 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGA6Q9Y5G7 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGA6Q9Y5G7 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGA6Q9Y5G7 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
PCDHGA6Q9Y5G7 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGA6Q9Y5G7 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
PCDHGA6Q9Y5G7 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGA6Q9Y5G7 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC16.19■□□□□ 0.18
PCDHGA6Q9Y5G7 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC16.19■□□□□ 0.18
PCDHGA6Q9Y5G7 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC16.19■□□□□ 0.18
PCDHGA6Q9Y5G7 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC16.19■□□□□ 0.18
PCDHGA6Q9Y5G7 AP000344.2-201ENST00000512987 629 ntBASIC16.19■□□□□ 0.18
PCDHGA6Q9Y5G7 PUS1-205ENST00000535067 838 ntTSL 3 BASIC16.19■□□□□ 0.18
PCDHGA6Q9Y5G7 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC16.19■□□□□ 0.18
PCDHGA6Q9Y5G7 AP002472.1-201ENST00000577490 586 ntBASIC16.19■□□□□ 0.18
PCDHGA6Q9Y5G7 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.19■□□□□ 0.18
PCDHGA6Q9Y5G7 CITED2-204ENST00000618718 901 ntTSL 2 BASIC16.19■□□□□ 0.18
PCDHGA6Q9Y5G7 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGA6Q9Y5G7 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms