Protein–RNA interactions for Protein: Q9Y5F9

PCDHGB6, Protocadherin gamma-B6, humanhuman

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6Q9Y5F9 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGB6Q9Y5F9 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGB6Q9Y5F9 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGB6Q9Y5F9 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC15.95■□□□□ 0.14
PCDHGB6Q9Y5F9 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGB6Q9Y5F9 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGB6Q9Y5F9 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
PCDHGB6Q9Y5F9 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGB6Q9Y5F9 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
PCDHGB6Q9Y5F9 AC148477.5-201ENST00000625164 1645 ntBASIC15.94■□□□□ 0.14
PCDHGB6Q9Y5F9 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGB6Q9Y5F9 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.94■□□□□ 0.14
PCDHGB6Q9Y5F9 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
PCDHGB6Q9Y5F9 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGB6Q9Y5F9 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC15.94■□□□□ 0.14
PCDHGB6Q9Y5F9 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC15.94■□□□□ 0.14
PCDHGB6Q9Y5F9 YBX2P1-201ENST00000394192 760 ntBASIC15.94■□□□□ 0.14
PCDHGB6Q9Y5F9 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC15.94■□□□□ 0.14
PCDHGB6Q9Y5F9 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC15.94■□□□□ 0.14
PCDHGB6Q9Y5F9 MIR3687-2-201ENST00000577708 61 ntBASIC15.94■□□□□ 0.14
PCDHGB6Q9Y5F9 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC15.94■□□□□ 0.14
PCDHGB6Q9Y5F9 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC15.94■□□□□ 0.14
PCDHGB6Q9Y5F9 MTDHP5-201ENST00000598980 586 ntBASIC15.94■□□□□ 0.14
PCDHGB6Q9Y5F9 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
PCDHGB6Q9Y5F9 MIR3687-1-201ENST00000614492 61 ntBASIC15.94■□□□□ 0.14
PCDHGB6Q9Y5F9 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGB6Q9Y5F9 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC15.94■□□□□ 0.14
PCDHGB6Q9Y5F9 GPR89P-201ENST00000407924 1495 ntBASIC15.94■□□□□ 0.14
PCDHGB6Q9Y5F9 AC009336.1-201ENST00000608941 1553 ntBASIC15.94■□□□□ 0.14
PCDHGB6Q9Y5F9 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGB6Q9Y5F9 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC15.94■□□□□ 0.14
PCDHGB6Q9Y5F9 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
PCDHGB6Q9Y5F9 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGB6Q9Y5F9 CA12-203ENST00000422263 2556 ntTSL 2 BASIC15.94■□□□□ 0.14
PCDHGB6Q9Y5F9 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGB6Q9Y5F9 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGB6Q9Y5F9 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGB6Q9Y5F9 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC15.94■□□□□ 0.14
PCDHGB6Q9Y5F9 FRMD6-AS1-201ENST00000617151 2229 ntBASIC15.94■□□□□ 0.14
PCDHGB6Q9Y5F9 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGB6Q9Y5F9 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
PCDHGB6Q9Y5F9 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
PCDHGB6Q9Y5F9 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGB6Q9Y5F9 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGB6Q9Y5F9 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC15.94■□□□□ 0.14
PCDHGB6Q9Y5F9 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
PCDHGB6Q9Y5F9 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGB6Q9Y5F9 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGB6Q9Y5F9 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
PCDHGB6Q9Y5F9 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.93■□□□□ 0.14
PCDHGB6Q9Y5F9 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGB6Q9Y5F9 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGB6Q9Y5F9 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGB6Q9Y5F9 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGB6Q9Y5F9 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC15.93■□□□□ 0.14
PCDHGB6Q9Y5F9 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGB6Q9Y5F9 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGB6Q9Y5F9 RPSAP43-201ENST00000402237 625 ntBASIC15.93■□□□□ 0.14
PCDHGB6Q9Y5F9 ATP6V0CP3-201ENST00000417255 467 ntBASIC15.93■□□□□ 0.14
PCDHGB6Q9Y5F9 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGB6Q9Y5F9 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC15.93■□□□□ 0.14
PCDHGB6Q9Y5F9 IGHV3-65-201ENST00000523210 341 ntBASIC15.93■□□□□ 0.14
PCDHGB6Q9Y5F9 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC15.93■□□□□ 0.14
PCDHGB6Q9Y5F9 AC064836.3-201ENST00000607928 673 ntBASIC15.93■□□□□ 0.14
PCDHGB6Q9Y5F9 HOTTIP_1.1-201ENST00000620415 57 ntBASIC15.93■□□□□ 0.14
PCDHGB6Q9Y5F9 AL805961.1-202ENST00000641562 540 ntBASIC15.93■□□□□ 0.14
PCDHGB6Q9Y5F9 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC15.93■□□□□ 0.14
PCDHGB6Q9Y5F9 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
PCDHGB6Q9Y5F9 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGB6Q9Y5F9 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
PCDHGB6Q9Y5F9 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGB6Q9Y5F9 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGB6Q9Y5F9 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGB6Q9Y5F9 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.93■□□□□ 0.14
PCDHGB6Q9Y5F9 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGB6Q9Y5F9 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGB6Q9Y5F9 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGB6Q9Y5F9 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGB6Q9Y5F9 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHGB6Q9Y5F9 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHGB6Q9Y5F9 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHGB6Q9Y5F9 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
PCDHGB6Q9Y5F9 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHGB6Q9Y5F9 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC15.92■□□□□ 0.14
PCDHGB6Q9Y5F9 AC006504.4-201ENST00000592118 1568 ntBASIC15.92■□□□□ 0.14
PCDHGB6Q9Y5F9 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
PCDHGB6Q9Y5F9 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHGB6Q9Y5F9 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC15.92■□□□□ 0.14
PCDHGB6Q9Y5F9 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHGB6Q9Y5F9 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
PCDHGB6Q9Y5F9 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHGB6Q9Y5F9 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
PCDHGB6Q9Y5F9 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
PCDHGB6Q9Y5F9 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC15.92■□□□□ 0.14
PCDHGB6Q9Y5F9 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC15.92■□□□□ 0.14
PCDHGB6Q9Y5F9 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHGB6Q9Y5F9 ELK2BP-201ENST00000415014 1224 ntBASIC15.92■□□□□ 0.14
PCDHGB6Q9Y5F9 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC15.92■□□□□ 0.14
PCDHGB6Q9Y5F9 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC15.92■□□□□ 0.14
PCDHGB6Q9Y5F9 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC15.92■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms