Protein–RNA interactions for Protein: Q9Y2A7

NCKAP1, Nck-associated protein 1, humanhuman

Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1Q9Y2A7 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NCKAP1Q9Y2A7 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.79■□□□□ 0.28
NCKAP1Q9Y2A7 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NCKAP1Q9Y2A7 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NCKAP1Q9Y2A7 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NCKAP1Q9Y2A7 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NCKAP1Q9Y2A7 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.78■□□□□ 0.28
NCKAP1Q9Y2A7 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC16.78■□□□□ 0.28
NCKAP1Q9Y2A7 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
NCKAP1Q9Y2A7 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NCKAP1Q9Y2A7 TUBB8P12-201ENST00000308911 1335 ntBASIC16.78■□□□□ 0.28
NCKAP1Q9Y2A7 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NCKAP1Q9Y2A7 TUBB7P-202ENST00000428444 1305 ntBASIC16.78■□□□□ 0.28
NCKAP1Q9Y2A7 TUBB8P7-204ENST00000567960 1332 ntBASIC16.78■□□□□ 0.28
NCKAP1Q9Y2A7 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
NCKAP1Q9Y2A7 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.78■□□□□ 0.28
NCKAP1Q9Y2A7 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.78■□□□□ 0.28
NCKAP1Q9Y2A7 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC16.78■□□□□ 0.28
NCKAP1Q9Y2A7 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NCKAP1Q9Y2A7 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
NCKAP1Q9Y2A7 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
NCKAP1Q9Y2A7 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NCKAP1Q9Y2A7 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
NCKAP1Q9Y2A7 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NCKAP1Q9Y2A7 PTMS-202ENST00000389462 773 ntTSL 2 BASIC16.78■□□□□ 0.28
NCKAP1Q9Y2A7 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.78■□□□□ 0.28
NCKAP1Q9Y2A7 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NCKAP1Q9Y2A7 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC16.78■□□□□ 0.28
NCKAP1Q9Y2A7 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC16.78■□□□□ 0.28
NCKAP1Q9Y2A7 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
NCKAP1Q9Y2A7 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.78■□□□□ 0.28
NCKAP1Q9Y2A7 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NCKAP1Q9Y2A7 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.78■□□□□ 0.28
NCKAP1Q9Y2A7 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NCKAP1Q9Y2A7 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
NCKAP1Q9Y2A7 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.78■□□□□ 0.28
NCKAP1Q9Y2A7 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.78■□□□□ 0.28
NCKAP1Q9Y2A7 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.78■□□□□ 0.28
NCKAP1Q9Y2A7 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NCKAP1Q9Y2A7 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC16.78■□□□□ 0.28
NCKAP1Q9Y2A7 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
NCKAP1Q9Y2A7 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NCKAP1Q9Y2A7 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NCKAP1Q9Y2A7 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.78■□□□□ 0.28
NCKAP1Q9Y2A7 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC16.77■□□□□ 0.28
NCKAP1Q9Y2A7 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
NCKAP1Q9Y2A7 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
NCKAP1Q9Y2A7 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NCKAP1Q9Y2A7 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
NCKAP1Q9Y2A7 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
NCKAP1Q9Y2A7 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
NCKAP1Q9Y2A7 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
NCKAP1Q9Y2A7 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
NCKAP1Q9Y2A7 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
NCKAP1Q9Y2A7 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
NCKAP1Q9Y2A7 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.77■□□□□ 0.28
NCKAP1Q9Y2A7 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NCKAP1Q9Y2A7 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NCKAP1Q9Y2A7 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NCKAP1Q9Y2A7 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
NCKAP1Q9Y2A7 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC16.77■□□□□ 0.28
NCKAP1Q9Y2A7 BCRP1-201ENST00000444246 691 ntBASIC16.77■□□□□ 0.28
NCKAP1Q9Y2A7 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
NCKAP1Q9Y2A7 KLF2P3-201ENST00000451977 1087 ntBASIC16.77■□□□□ 0.28
NCKAP1Q9Y2A7 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC16.77■□□□□ 0.28
NCKAP1Q9Y2A7 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NCKAP1Q9Y2A7 KRT18P34-201ENST00000488218 1270 ntBASIC16.77■□□□□ 0.28
NCKAP1Q9Y2A7 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC16.77■□□□□ 0.28
NCKAP1Q9Y2A7 AC093214.1-201ENST00000511688 1107 ntBASIC16.77■□□□□ 0.28
NCKAP1Q9Y2A7 AC124947.2-201ENST00000547118 1133 ntBASIC16.77■□□□□ 0.28
NCKAP1Q9Y2A7 DUX4L27-201ENST00000554796 1261 ntBASIC16.77■□□□□ 0.28
NCKAP1Q9Y2A7 AC026150.2-201ENST00000564693 1156 ntBASIC16.77■□□□□ 0.28
NCKAP1Q9Y2A7 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NCKAP1Q9Y2A7 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC16.77■□□□□ 0.28
NCKAP1Q9Y2A7 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC16.77■□□□□ 0.28
NCKAP1Q9Y2A7 AC084121.4-201ENST00000641598 221 ntBASIC16.77■□□□□ 0.28
NCKAP1Q9Y2A7 AF228730.8-201ENST00000642140 221 ntBASIC16.77■□□□□ 0.28
NCKAP1Q9Y2A7 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
NCKAP1Q9Y2A7 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.77■□□□□ 0.28
NCKAP1Q9Y2A7 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NCKAP1Q9Y2A7 AC016027.1-202ENST00000607927 1699 ntBASIC16.77■□□□□ 0.28
NCKAP1Q9Y2A7 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.27
NCKAP1Q9Y2A7 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
NCKAP1Q9Y2A7 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
NCKAP1Q9Y2A7 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
NCKAP1Q9Y2A7 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.77■□□□□ 0.27
NCKAP1Q9Y2A7 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.77■□□□□ 0.27
NCKAP1Q9Y2A7 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
NCKAP1Q9Y2A7 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.27
NCKAP1Q9Y2A7 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
NCKAP1Q9Y2A7 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
NCKAP1Q9Y2A7 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NCKAP1Q9Y2A7 AC139713.2-201ENST00000641328 2723 ntBASIC16.76■□□□□ 0.27
NCKAP1Q9Y2A7 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NCKAP1Q9Y2A7 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
NCKAP1Q9Y2A7 LINC02012-201ENST00000608206 1725 ntBASIC16.76■□□□□ 0.27
NCKAP1Q9Y2A7 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
NCKAP1Q9Y2A7 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NCKAP1Q9Y2A7 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NCKAP1Q9Y2A7 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms