Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
COPS3Q9UNS2 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC15.03■□□□□ -0
COPS3Q9UNS2 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC15.03■□□□□ -0
COPS3Q9UNS2 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
COPS3Q9UNS2 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
COPS3Q9UNS2 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
COPS3Q9UNS2 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
COPS3Q9UNS2 AP002414.1-201ENST00000391405 1147 ntBASIC15.03■□□□□ -0
COPS3Q9UNS2 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
COPS3Q9UNS2 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
COPS3Q9UNS2 IGHV3-47-201ENST00000425060 335 ntBASIC15.03■□□□□ -0
COPS3Q9UNS2 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC15.03■□□□□ -0
COPS3Q9UNS2 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC15.03■□□□□ -0
COPS3Q9UNS2 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
COPS3Q9UNS2 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC15.03■□□□□ -0
COPS3Q9UNS2 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC15.03■□□□□ -0
COPS3Q9UNS2 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC15.03■□□□□ -0
COPS3Q9UNS2 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC15.03■□□□□ -0
COPS3Q9UNS2 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC15.03■□□□□ -0
COPS3Q9UNS2 AC116407.4-201ENST00000623319 1061 ntBASIC15.03■□□□□ -0
COPS3Q9UNS2 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
COPS3Q9UNS2 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
COPS3Q9UNS2 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
COPS3Q9UNS2 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
COPS3Q9UNS2 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.03■□□□□ -0
COPS3Q9UNS2 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
COPS3Q9UNS2 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC15.03■□□□□ -0
COPS3Q9UNS2 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC15.03■□□□□ -0
COPS3Q9UNS2 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
COPS3Q9UNS2 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
COPS3Q9UNS2 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC15.03■□□□□ -0
COPS3Q9UNS2 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC15.03■□□□□ -0
COPS3Q9UNS2 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
COPS3Q9UNS2 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
COPS3Q9UNS2 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
COPS3Q9UNS2 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC15.03■□□□□ -0
COPS3Q9UNS2 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC15.03■□□□□ -0
COPS3Q9UNS2 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
COPS3Q9UNS2 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC15.02■□□□□ -0
COPS3Q9UNS2 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
COPS3Q9UNS2 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC15.02■□□□□ -0
COPS3Q9UNS2 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC15.02■□□□□ -0
COPS3Q9UNS2 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC15.02■□□□□ -0
COPS3Q9UNS2 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC15.02■□□□□ -0
COPS3Q9UNS2 FOS-208ENST00000555686 1496 ntTSL 2 BASIC15.02■□□□□ -0
COPS3Q9UNS2 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
COPS3Q9UNS2 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC15.02■□□□□ -0
COPS3Q9UNS2 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC15.02■□□□□ -0
COPS3Q9UNS2 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
COPS3Q9UNS2 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
COPS3Q9UNS2 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
COPS3Q9UNS2 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC15.02■□□□□ -0
COPS3Q9UNS2 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.02■□□□□ -0
COPS3Q9UNS2 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
COPS3Q9UNS2 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC15.02■□□□□ -0
COPS3Q9UNS2 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
COPS3Q9UNS2 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
COPS3Q9UNS2 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
COPS3Q9UNS2 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
COPS3Q9UNS2 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC15.02■□□□□ -0
COPS3Q9UNS2 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
COPS3Q9UNS2 LINC00982-205ENST00000420957 435 ntBASIC15.02■□□□□ -0
COPS3Q9UNS2 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC15.02■□□□□ -0
COPS3Q9UNS2 LINC00265-3P-201ENST00000447588 903 ntBASIC15.02■□□□□ -0
COPS3Q9UNS2 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC15.02■□□□□ -0
COPS3Q9UNS2 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC15.02■□□□□ -0
COPS3Q9UNS2 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC15.02■□□□□ -0
COPS3Q9UNS2 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC15.02■□□□□ -0
COPS3Q9UNS2 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC15.02■□□□□ -0
COPS3Q9UNS2 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
COPS3Q9UNS2 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC15.02■□□□□ -0
COPS3Q9UNS2 AC114341.1-201ENST00000618070 349 ntBASIC15.02■□□□□ -0
COPS3Q9UNS2 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC15.02□□□□□ -0.01
COPS3Q9UNS2 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC15.02□□□□□ -0.01
COPS3Q9UNS2 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
COPS3Q9UNS2 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15.02□□□□□ -0.01
COPS3Q9UNS2 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC15.02□□□□□ -0.01
COPS3Q9UNS2 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
COPS3Q9UNS2 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
COPS3Q9UNS2 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
COPS3Q9UNS2 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15.02□□□□□ -0.01
COPS3Q9UNS2 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
COPS3Q9UNS2 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
COPS3Q9UNS2 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
COPS3Q9UNS2 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
COPS3Q9UNS2 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
COPS3Q9UNS2 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
COPS3Q9UNS2 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
COPS3Q9UNS2 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
COPS3Q9UNS2 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
COPS3Q9UNS2 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC15.02□□□□□ -0.01
COPS3Q9UNS2 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC15.02□□□□□ -0.01
COPS3Q9UNS2 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
COPS3Q9UNS2 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
COPS3Q9UNS2 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
COPS3Q9UNS2 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC15.01□□□□□ -0.01
COPS3Q9UNS2 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
COPS3Q9UNS2 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
COPS3Q9UNS2 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
COPS3Q9UNS2 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms